DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila. - Wikidata - awgldk - TriplyDB

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila.

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila.

http://www.wikidata.org/entity/Q36504410

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Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression Epigenetic mechanisms and developmental choice hierarchies in T-lymphocyte development Beyond the ENCODE project: using genomics and epigenomics strategies to study enhancer evolution Using the ENCODE Resource for Functional Annotation of Genetic Variants Homotypic clusters of transcription factor binding sites: A model system for understanding the physical mechanics of gene expression Functional Brachyury binding sites establish a temporal read-out of gene expression in the Ciona notochord A common set of DNA regulatory elements shapes Drosophila appendages Single-molecule dynamics of enhanceosome assembly in embryonic stem cells.Identification of introns harboring functional sequence elements through positional conservation.Absence of a simple code: how transcription factors read the genome Evolution of transcription factor binding in metazoans - mechanisms and functional implications.Understanding the regulatory and transcriptional complexity of the genome through structure.Cooperativity and rapid evolution of cobound transcription factors in closely related mammals Capicua is involved in Dorsal-mediated repression of zerknüllt expression in Drosophila embryo.Chromatin reader L(3)mbt requires the Myb-MuvB/DREAM transcriptional regulatory complex for chromosomal recruitment Sex- and tissue-specific functions of Drosophila doublesex transcription factor target genes.Estimating binding properties of transcription factors from genome-wide binding profiles.Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning.Cis-regulatory timers for developmental gene expression.Identifying transcriptional cis-regulatory modules in animal genomes.Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways.Mammalian transcriptional hotspots are enriched for tissue specific enhancers near cell type specific highly expressed genes and are predicted to act as transcriptional activator hubs.Re-thinking miRNA-mRNA interactions: intertwining issues confound target discovery.Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila.Making sense of transcription networks Genome-wide errant targeting by Hairy.Combinatorial complexity in a transcriptionally centered signaling hub in Arabidopsis.Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo.ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo.Influence of quasi-specific sites on kinetics of target DNA search by a sequence-specific DNA-binding protein.The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub.Genome-Wide Approaches to Drosophila Heart Development X-marks the spot: X-chromosome identification during dosage compensation Regulation of transcription factors via natural decoys in genomic DNA.lolal Is an Evolutionarily New Epigenetic Regulator of dpp Transcription during Dorsal-Ventral Axis Formation.Inducible protein traps with dominant phenotypes for functional analysis of the Drosophila genome.Systematic dissection of genomic features determining transcription factor binding and enhancer function.Impacts of the ubiquitous factor Zelda on Bicoid-dependent DNA binding and transcription in Drosophila.Deep conservation of cis-regulatory elements in metazoans.

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P2860

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila.

http://www.wikidata.org/entity/Q36504410

description

2012 nî lūn-bûn

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DNA regions bound at low occup ...... gene expression in Drosophila.

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DNA regions bound at low occup ...... gene expression in Drosophila.

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DNA regions bound at low occup ...... gene expression in Drosophila.

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DNA regions bound at low occup ...... gene expression in Drosophila.

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DNA regions bound at low occup ...... gene expression in Drosophila.

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DNA regions bound at low occup ...... gene expression in Drosophila.

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PNAS.1209589110

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Proceedings of the National Academy of Sciences of the United States of America

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DNA regions bound at low occup ...... gene expression in Drosophila.

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Ann S Hammonds

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Barret D Pfeiffer

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James B Brown

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Mark D Biggin

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Peter J Bickel

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Richard Weiszmann

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Sean Thomas

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Stewart MacArthur

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Susan E Celniker

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William W Fisher

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P2860

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

Regulation of even-skipped stripe 2 in the Drosophila embryo

Insights from genomic profiling of transcription factors

Statistical significance for genomewide studies

Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura

ChIP-seq accurately predicts tissue-specific activity of enhancers

A transcription factor collective defines cardiac cell fate and reflects lineage history

Quantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila development

Functional sequestration of transcription factor activity by repetitive DNA

Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liver

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21330-21335

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10.1073/PNAS.1209589110

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52

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109

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Jingyi Jessica Li

John A Stamatoyannopoulos

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2012-12-10T00:00:00Z

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233909487

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23236164

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