Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.
about
The protein folding problemElectrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteinsDe novo prediction of protein folding pathways and structure using the principle of sequential stabilizationEstimation of protein folding free energy barriers from calorimetric data by multi-model Bayesian analysis.An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.Folding of proteins with an all-atom Go-model.Effects of frustration, confinement, and surface interactions on the dimerization of an off-lattice beta-barrel protein.Posttransition state desolvation of the hydrophobic core of the src-SH3 protein domainProbing the folding free energy landscape of the Src-SH3 protein domain.The dual role of a loop with low loop contact distance in folding and domain swapping.Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapseWang-Landau simulation of Gō model molecules.Slipknotting upon native-like loop formation in a trefoil knot protein.How well does a funneled energy landscape capture the folding mechanism of spectrin domains?Structure-based simulations reveal concerted dynamics of GPCR activationCytochrome c' folding triggered by electron transfer: fast and slow formation of four-helix bundlesKnotting and unknotting proteins in the chaperonin cage: Effects of the excluded volumeFolding a protein in a computer: an atomic description of the folding/unfolding of protein A.A funneled energy landscape for cytochrome c directly predicts the sequential folding route inferred from hydrogen exchange experiments.Extracting function from a beta-trefoil folding motifThe ensemble folding kinetics of protein G from an all-atom Monte Carlo simulation.Quantifying the Sources of Kinetic Frustration in Folding Simulations of Small Proteins.An atomically detailed study of the folding pathways of protein A with the stochastic difference equationPrepaying the entropic cost for allosteric regulation in KIXVariations in the fast folding rates of the lambda-repressor: a hybrid molecular dynamics study.A structural model of polyglutamine determined from a host-guest method combining experiments and landscape theory.Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions.Structured disorder and conformational selection.Equilibrium and kinetic folding pathways of a TIM barrel with a funneled energy landscapeConfinement effects on the thermodynamics of protein folding: Monte Carlo simulations.Atomically detailed folding simulation of the B domain of staphylococcal protein A from random structures.Landscape approaches for determining the ensemble of folding transition states: success and failure hinge on the degree of frustration.Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditionsFlexibly varying folding mechanism of a nearly symmetrical protein: B domain of protein A.The topomer search model: A simple, quantitative theory of two-state protein folding kinetics.Modulation of folding energy landscape by charge-charge interactions: linking experiments with computational modelingDependence of internal friction on folding mechanism.Nonglassy kinetics in the folding of a simple single-domain protein.Anatomy of protein structures: visualizing how a one-dimensional protein chain folds into a three-dimensional shape.Three-helix-bundle protein in a Ramachandran model.
P2860
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P2860
Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.
description
1999 nî lūn-bûn
@nan
1999年の論文
@ja
1999年論文
@yue
1999年論文
@zh-hant
1999年論文
@zh-hk
1999年論文
@zh-mo
1999年論文
@zh-tw
1999年论文
@wuu
1999年论文
@zh
1999年论文
@zh-cn
name
Exploring the origins of topol ...... el of fragment B of protein A.
@ast
Exploring the origins of topol ...... el of fragment B of protein A.
@en
type
label
Exploring the origins of topol ...... el of fragment B of protein A.
@ast
Exploring the origins of topol ...... el of fragment B of protein A.
@en
prefLabel
Exploring the origins of topol ...... el of fragment B of protein A.
@ast
Exploring the origins of topol ...... el of fragment B of protein A.
@en
P2093
P2860
P356
P1476
Exploring the origins of topol ...... el of fragment B of protein A.
@en
P2093
P2860
P304
12512-12517
P356
10.1073/PNAS.96.22.12512
P407
P577
1999-10-01T00:00:00Z