Alignment-free sequence comparison based on next-generation sequencing reads.
about
Comparison of metatranscriptomic samples based on k-tuple frequenciesNew developments of alignment-free sequence comparison: measures, statistics and next-generation sequencingComparison of next-generation sequencing samples using compression-based distances and its application to phylogenetic reconstruction.Inference of Markovian properties of molecular sequences from NGS data and applications to comparative genomics.Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses.Alignment-free protein interaction network comparisonNext generation sequencing reads comparison with an alignment-free distance.Centroid based clustering of high throughput sequencing reads based on n-mer counts.Assembly-free genome comparison based on next-generation sequencing reads and variable length patterns.An assembly and alignment-free method of phylogeny reconstruction from next-generation sequencing dataOn the comparison of regulatory sequences with multiple resolution Entropic Profiles.Reduction, alignment and visualisation of large diverse sequence families.Fast comparison of genomic and meta-genomic reads with alignment-free measures based on quality valuesLAF: Logic Alignment Free and its application to bacterial genomes classification.Alignment-free microbial phylogenomics under scenarios of sequence divergence, genome rearrangement and lateral genetic transferMultiple alignment-free sequence comparison.Alignment-free Transcriptomic and Metatranscriptomic Comparison Using Sequencing Signatures with Variable Length Markov Chains.Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences.Clustering of reads with alignment-free measures and quality values.Improving contig binning of metagenomic data using [Formula: see text] oligonucleotide frequency dissimilarity.kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity.Fast alignment-free sequence comparison using spaced-word frequencies.Optimal choice of word length when comparing two Markov sequences using a χ 2-statistic.Alignment-free sequence comparison: benefits, applications, and tools.Phylogenomics of tomato chloroplasts using assembly and alignment-free method.String-Matching and Alignment Algorithms for Finding Motifs in NGS DataGePMI: A statistical model for personal intestinal microbiome identification
P2860
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P2860
Alignment-free sequence comparison based on next-generation sequencing reads.
description
2013 nî lūn-bûn
@nan
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
2013年论文
@zh
2013年论文
@zh-cn
name
Alignment-free sequence comparison based on next-generation sequencing reads.
@ast
Alignment-free sequence comparison based on next-generation sequencing reads.
@en
type
label
Alignment-free sequence comparison based on next-generation sequencing reads.
@ast
Alignment-free sequence comparison based on next-generation sequencing reads.
@en
prefLabel
Alignment-free sequence comparison based on next-generation sequencing reads.
@ast
Alignment-free sequence comparison based on next-generation sequencing reads.
@en
P2093
P2860
P356
P1476
Alignment-free sequence comparison based on next-generation sequencing reads.
@en
P2093
Fengzhu Sun
Minghua Deng
Xuemei Liu
Zhiyuan Zhai
P2860
P356
10.1089/CMB.2012.0228
P577
2013-02-01T00:00:00Z