A continuum method for determining membrane protein insertion energies and the problem of charged residues.
about
A knowledge-based potential highlights unique features of membrane α-helical and β-barrel protein insertion and folding.Membrane protein native state discrimination by implicit membrane models.Membrane environment modulates the pKa values of transmembrane helicesAPBSmem: a graphical interface for electrostatic calculations at the membrane.Not just an oil slick: how the energetics of protein-membrane interactions impacts the function and organization of transmembrane proteins.Implicit membrane treatment of buried charged groups: application to peptide translocation across lipid bilayers.Electrostatics of deformable lipid membranes.Chemical versus mechanical perturbations on the protonation state of arginine in complex lipid membranes: insights from microscopic pKa calculationsThe energetics of transmembrane helix insertion into a lipid bilayer.Reconciling structural and thermodynamic predictions using all-atom and coarse-grain force fields: the case of charged oligo-arginine translocation into DMPC bilayersFree energetics of arginine permeation into model DMPC lipid bilayers: coupling of effective counterion concentration and lateral bilayer dimensionsInvestigating Hydrophilic Pores in Model Lipid Bilayers Using Molecular Simulations: Correlating Bilayer Properties with Pore-Formation Thermodynamics.Free-energy cost for translocon-assisted insertion of membrane proteins.Quantitative modeling of membrane deformations by multihelical membrane proteins: application to G-protein coupled receptorsSolid-State NMR-Restrained Ensemble Dynamics of a Membrane Protein in Explicit MembranesInteractions of amino acid side-chain analogs within membrane environments.Determination of membrane-insertion free energies by molecular dynamics simulations.Why GPCRs behave differently in cubic and lamellar lipidic mesophases.Membrane-mediated protein-protein interactions and connection to elastic models: a coarse-grained simulation analysis of gramicidin A association.Three-dimensional stress field around a membrane protein: atomistic and coarse-grained simulation analysis of gramicidin A.The cost of living in the membrane: a case study of hydrophobic mismatch for the multi-segment protein LeuT.Assessing smectic liquid-crystal continuum models for elastic bilayer deformations.Transmembrane helix association affinity can be modulated by flanking and noninterfacial residues.Finding and characterizing tunnels in macromolecules with application to ion channels and pores.Atomistic insight into lipid translocation by a TMEM16 scramblase.Continuum descriptions of membranes and their interaction with proteins: Towards chemically accurate models.Dynamic Heterogeneous Dielectric Generalized Born (DHDGB): An implicit membrane model with a dynamically varying bilayer thickness.Refining the treatment of membrane proteins by coarse-grained models.Transmembrane helix hydrophobicity is an energetic barrier during the retrotranslocation of integral membrane ERAD substratesContinuum approaches to understanding ion and peptide interactions with the membrane.Polar groups in membrane channels: consequences of replacing alanines with serines in membrane-spanning gramicidin channels.Electroelastic coupling between membrane surface fluctuations and membrane-embedded charges: continuum multidielectric treatmentMembrane bending is critical for the stability of voltage sensor segments in the membrane.Synaptobrevin transmembrane domain influences exocytosis by perturbing vesicle membrane curvature.Transfer of arginine into lipid bilayers is nonadditive.New Continuum Approaches for Determining Protein-Induced Membrane Deformations.An engineered opsin monomer scrambles phospholipids.Symmetry and Size of Membrane Protein Polyhedral Nanoparticles.Continuum electromechanical modeling of protein-membrane interactions.
P2860
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P2860
A continuum method for determining membrane protein insertion energies and the problem of charged residues.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
A continuum method for determi ...... e problem of charged residues.
@ast
A continuum method for determi ...... e problem of charged residues.
@en
type
label
A continuum method for determi ...... e problem of charged residues.
@ast
A continuum method for determi ...... e problem of charged residues.
@en
prefLabel
A continuum method for determi ...... e problem of charged residues.
@ast
A continuum method for determi ...... e problem of charged residues.
@en
P2093
P2860
P356
P1476
A continuum method for determi ...... e problem of charged residues.
@en
P2093
Karen A Hecht
Michael Grabe
Seungho Choe
P2860
P304
P356
10.1085/JGP.200809959
P577
2008-05-12T00:00:00Z