A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets
about
Correction of spatial bias in oligonucleotide array data.New methods to analyse microarray data that partially lack a reference signal.Experimental analysis of oligonucleotide microarray design criteria to detect deletions by comparative genomic hybridizationDesign of 240,000 orthogonal 25mer DNA barcode probes.Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencingDirect calibration of PICKY-designed microarrays.Hybridization thermodynamics of NimbleGen microarrays.Tailoring DNA structure to increase target hybridization kinetics on surfaces.Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays.Beyond Affymetrix arrays: expanding the set of known hybridization isotherms and observing pre-wash signal intensities.Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variationThe impact of quantitative optimization of hybridization conditions on gene expression analysis.Investigation of the Staphylococcus aureus GraSR regulon reveals novel links to virulence, stress response and cell wall signal transduction pathwaysA cross-platform comparison of affymetrix and Agilent microarrays reveals discordant miRNA expression in lung tumors of c-Raf transgenic miceShould all smokers use combination smoking cessation pharmacotherapy? Using novel analytic methods to detect differential treatment effects over 8 weeks of pharmacotherapy.Optimization of signal-to-noise ratio for efficient microarray probe design.The WalKR system controls major staphylococcal virulence genes and is involved in triggering the host inflammatory responseA systematic evaluation of nucleotide properties for CRISPR sgRNA design.A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities.An evaluation of custom microarray applications: the oligonucleotide design challenge.De Novo identification of single nucleotide mutations in Caenorhabditis elegans using array comparative genomic hybridization.Sources of high variance between probe signals in Affymetrix short oligonucleotide microarrays.Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.Model-based probe set optimization for high-performance microarraysA statistical framework for Illumina DNA methylation arrays.Multi-stringency wash of partially hybridized 60-mer probes reveals that the stringency along the probe decreases with distance from the microarray surface.
P2860
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P2860
A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets
description
2008 nî lūn-bûn
@nan
2008年の論文
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2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
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name
A study of the relationships b ...... NimbleGen microarray datasets
@ast
A study of the relationships b ...... NimbleGen microarray datasets
@en
type
label
A study of the relationships b ...... NimbleGen microarray datasets
@ast
A study of the relationships b ...... NimbleGen microarray datasets
@en
prefLabel
A study of the relationships b ...... NimbleGen microarray datasets
@ast
A study of the relationships b ...... NimbleGen microarray datasets
@en
P2093
P2860
P356
P1476
A study of the relationships b ...... NimbleGen microarray datasets
@en
P2093
Chuhu Yang
Gudrun A Jonsdottir
Hairong Wei
James A Thomson
Pei Fen Kuan
Ron Stewart
Shulan Tian
Srikumar Sengupta
Sunduz Keles
P2860
P304
P356
10.1093/NAR/GKN133
P407
P577
2008-04-01T00:00:00Z