Global jumping and domain-specific intersegment transfer between DNA cognate sites of the multidomain transcription factor Oct-1.
about
An integrated model of transcription factor diffusion shows the importance of intersegmental transfer and quaternary protein structure for target site finding.Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes.Tethered-hopping model for protein-DNA binding and unbinding based on Sox2-Oct1-Hoxb1 ternary complex simulations.Visualizing one-dimensional diffusion of eukaryotic DNA repair factors along a chromatin lattice.Solution structure and intramolecular exchange of methyl-cytosine binding domain protein 4 (MBD4) on DNA suggests a mechanism to scan for mCpG/TpG mismatches.DNA search efficiency is modulated by charge composition and distribution in the intrinsically disordered tail.Probing the rate-limiting step for intramolecular transfer of a transcription factor between specific sites on the same DNA molecule by (15)Nz-exchange NMR spectroscopy.Exploring sparsely populated states of macromolecules by diamagnetic and paramagnetic NMR relaxation.An introduction to NMR-based approaches for measuring protein dynamics.Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA.Intra- and intermolecular translocation of the bi-domain transcription factor Oct1 characterized by liquid crystal and paramagnetic NMR.Dynamic conformational change regulates the protein-DNA recognition: an investigation on binding of a Y-family polymerase to its target DNA.Exploring translocation of proteins on DNA by NMRCooperative DNA Recognition Modulated by an Interplay between Protein-Protein Interactions and DNA-Mediated Allostery.Functional interplay between the RK motif and linker segment dictates Oct4-DNA recognition.Single-molecule imaging of DNA curtains reveals mechanisms of KOPS sequence targeting by the DNA translocase FtsK.Interplay between minor and major groove-binding transcription factors Sox2 and Oct1 in translocation on DNA studied by paramagnetic and diamagnetic NMR.Balancing between affinity and speed in target DNA search by zinc-finger proteins via modulation of dynamic conformational ensembleDNA-Segment-Facilitated Dissociation of Fis and NHP6A from DNA Detected via Single-Molecule Mechanical Response.Impact of protein/protein interactions on global intermolecular translocation rates of the transcription factors Sox2 and Oct1 between DNA cognate sites analyzed by z-exchange NMR spectroscopyFlexibility and Disorder in Gene Regulation: LacI/GalR and Hox Proteins.DNA concentration-dependent dissociation of EcoRI: direct transfer or reaction during hopping.Isolating contributions from intersegmental transfer to DNA searching by alkyladenine DNA glycosylase.MetJ repressor interactions with DNA probed by in-cell NMR.Transient DNA / RNA-protein interactions.Roles of intrinsic disorder in protein-nucleic acid interactions.Intrinsically disordered regions as affinity tuners in protein-DNA interactions.Proteins Recognizing DNA: Structural Uniqueness and Versatility of DNA-Binding Domains in Stem Cell Transcription Factors.Single-molecule fluorescence studies on DNA loopingMapping the Dynamics of the Glucocorticoid Receptor within the Nuclear Landscape.Facilitated DNA search by multidomain transcription factors: cross talk via a flexible linker.Protein dynamics elucidated by NMR technique.Searching target sites on DNA by proteins: Role of DNA dynamics under confinement.Intersegmental transfer of proteins between DNA regions in the presence of crowding.Discrete-State Kinetics Model for NMR-Based Analysis of Protein Translocation on DNA at Equilibrium.Processive searching ability varies among members of the gap-filling DNA polymerase X family.Facilitated Unbinding via Multivalency-Enabled Ternary Complexes: New Paradigm for Protein-DNA Interactions.Electrostatic control of DNA intersegmental translocation by the ETS transcription factor ETV6.Coarse-grained models for studying protein diffusion along DNAProtein motion in the nucleus: from anomalous diffusion to weak interactions
P2860
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P2860
Global jumping and domain-specific intersegment transfer between DNA cognate sites of the multidomain transcription factor Oct-1.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
Global jumping and domain-spec ...... in transcription factor Oct-1.
@en
type
label
Global jumping and domain-spec ...... in transcription factor Oct-1.
@en
prefLabel
Global jumping and domain-spec ...... in transcription factor Oct-1.
@en
P2860
P356
P1476
Global jumping and domain-spec ...... ain transcription factor Oct-1
@en
P2093
Michaeleen Doucleff
P2860
P304
13871-13876
P356
10.1073/PNAS.0805050105
P407
P577
2008-09-04T00:00:00Z