Decision tree-driven tandem mass spectrometry for shotgun proteomics. - Wikidata - awgldk - TriplyDB

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

http://www.wikidata.org/entity/Q37002998

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Analysis of the biogenesis of heparan sulfate acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides insights into the mechanism underlying its complete deficiency in mucopolysaccharidosis IIIC Recent advances in enrichment and separation strategies for mass spectrometry-based phosphoproteomics Mass spectrometry for translational proteomics: progress and clinical implications Protein kinase A can block EphA2 receptor-mediated cell repulsion by increasing EphA2 S897 phosphorylation Electron transfer dissociation mass spectrometry in proteomics Sequence comparison, molecular modeling, and network analysis predict structural diversity in cysteine proteases from the Cape sundew, Drosera capensis Quantitation and Identification of Thousands of Human Proteoforms below 30 kDa Ion Activation Methods for Peptides and Proteins Integrated proteomic analysis of major isoaspartyl-containing proteins in the urine of wild type and protein L-isoaspartate O-methyltransferase-deficient mice.Phosphoproteomics--more than meets the eye.Large-scale phosphoprotein analysis in Medicago truncatula roots provides insight into in vivo kinase activity in legumes.Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator Neutron-encoded signatures enable product ion annotation from tandem mass spectra.Current algorithmic solutions for peptide-based proteomics data generation and identification Large-scale label-free phosphoproteomics: from technology to data interpretation.Time-resolved observation of product ions generated by 157 nm photodissociation of singly protonated phosphopeptides.The effect of interfering ions on search algorithm performance for electron-transfer dissociation data.Trans-Proteomic Pipeline supports and improves analysis of electron transfer dissociation data sets.Gas-phase rearrangements do not affect site localization reliability in phosphoproteomics data sets.Polymerization-Incompetent Uromodulin in the Pregnant Stroke-Prone Spontaneously Hypertensive Rat.One-pot shotgun quantitative mass spectrometry characterization of histones Improving software performance for peptide electron transfer dissociation data analysis by implementation of charge state- and sequence-dependent scoring Phosphoproteomics for the masses Meta-analysis for protein identification: a case study on yeast data Biomarker discovery and clinical proteomics.Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance.Value of using multiple proteases for large-scale mass spectrometry-based proteomics Phosphoproteomic profiling reveals vasopressin-regulated phosphorylation sites in collecting duct Confetti: a multiprotease map of the HeLa proteome for comprehensive proteomics.A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry.Quantitative mass spectrometry of histones H3.2 and H3.3 in Suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36 NRMT2 is an N-terminal monomethylase that primes for its homologue NRMT1.A novel two-stage tandem mass spectrometry approach and scoring scheme for the identification of O-GlcNAc modified peptides.Mitotic spindle proteomics in Chinese hamster ovary cells Multisite phosphorylation of 14-3-3 proteins by calcium-dependent protein kinases.Sulfonium ion derivatization, isobaric stable isotope labeling and data dependent CID- and ETD-MS/MS for enhanced phosphopeptide quantitation, identification and phosphorylation site characterization.The acetyllysine reader BRD3R promotes human nuclear reprogramming and regulates mitosis A framework for intelligent data acquisition and real-time database searching for shotgun proteomics PeakLink: a new peptide peak linking method in LC-MS/MS using wavelet and SVM.Computational and statistical analysis of protein mass spectrometry data.

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Decision tree-driven tandem mass spectrometry for shotgun proteomics.

http://www.wikidata.org/entity/Q37002998

description

article científic

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article scientifique

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articolo scientifico

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artigo científico

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bilimsel makale

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scientific article published on 19 October 2008

@en

vedecký článok

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vetenskaplig artikel

@sv

videnskabelig artikel

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vědecký článek

@cs

name

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@en

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@nl

type

label

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@en

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@nl

prefLabel

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@en

Decision tree-driven tandem mass spectrometry for shotgun proteomics.

@nl

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Decision tree-driven tandem mass spectrometry for shotgun proteomics.

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Danielle L Swaney

http://www.w3.org/2001/XMLSchema#string

Graeme C McAlister

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Joshua J Coon

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P2860

Large-scale characterization of HeLa cell nuclear phosphoproteins

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

Mass spectrometry-based proteomics

Performance characteristics of electron transfer dissociation mass spectrometry

Implementation of ion/ion reactions in a quadrupole/time-of-flight tandem mass spectrometer

Tandem mass spectrometry for peptide and protein sequence analysis

Implementation of electron-transfer dissociation on a hybrid linear ion trap-orbitrap mass spectrometer

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

P2888

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959-964

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scholarly article

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10.1038/NMETH.1260

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11

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5

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2008-10-19T00:00:00Z

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