Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization. - Wikidata - awgldk - TriplyDB

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.

http://www.wikidata.org/entity/Q37085738

about

Non-homologous isofunctional enzymes: a systematic analysis of alternative solutions in enzyme evolution.A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea Catabolic and regulatory systems in Shewanella oneidensis MR-1 involved in electricity generation in microbial fuel cells Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation The octahaem SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1 Control of proteobacterial central carbon metabolism by the HexR transcriptional regulator: a case study in Shewanella oneidensis.Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.Characterization of the enhancement of zero valent iron on microbial azo reduction Genome sequencing of bacteria: sequencing, de novo assembly and rapid analysis using open source tools Reconstruction of xylose utilization pathway and regulons in Firmicutes.Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions.Genomic encyclopedia of sugar utilization pathways in the Shewanella genus An empirical strategy for characterizing bacterial proteomes across species in the absence of genomic sequences.Substrate-level phosphorylation is the primary source of energy conservation during anaerobic respiration of Shewanella oneidensis strain MR-1.Analysis of the BarA/UvrY two-component system in Shewanella oneidensis MR-1 A universal TagModule collection for parallel genetic analysis of microorganisms.Transcriptional analysis of Shewanella oneidensis MR-1 with an electrode compared to Fe(III)citrate or oxygen as terminal electron acceptor Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth Large-scale comparative phenotypic and genomic analyses reveal ecological preferences of shewanella species and identify metabolic pathways conserved at the genus level.Identification of the genes that contribute to lactate utilization in Helicobacter pylori An in vivo metabolic approach for deciphering the product specificity of glycerate kinase proves that both E. coli's glycerate kinases generate 2-phosphoglycerate.Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions Lactate oxidation coupled to iron or electrode reduction by Geobacter sulfurreducens PCA NAD-Independent L-Lactate Dehydrogenase Required for L-Lactate Utilization in Pseudomonas stutzeri A1501 Electron donors supporting growth and electroactivity of Geobacter sulfurreducens anode biofilms.Genome sequence of Pseudomonas stutzeri SDM-LAC, a typical strain for studying the molecular mechanism of lactate utilization The primary pathway for lactate oxidation in Desulfovibrio vulgaris.Metabolic Characteristics of a Glucose-Utilizing Shewanella oneidensis Strain Grown under Electrode-Respiring Conditions.Utilization of D-Lactate as an Energy Source Supports the Growth of Gluconobacter oxydans.An unconventional hexacoordinated flavohemoglobin from Mycobacterium tuberculosis.Detection of transcriptional triggers in the dynamics of microbial growth: application to the respiratorily versatile bacterium Shewanella oneidensis.Transcription factor family-based reconstruction of singleton regulons and study of the Crp/Fnr, ArsR, and GntR families in Desulfovibrionales genomes.¹³C Pathway Analysis for the Role of Formate in Electricity Generation by Shewanella Oneidensis MR-1 Using Lactate in Microbial Fuel Cells Variation among Desulfovibrio species in electron transfer systems used for syntrophic growth Shewanella spp. Use acetate as an electron donor for denitrification but not ferric iron or fumarate reduction Formate Metabolism in Shewanella oneidensis Generates Proton Motive Force and Prevents Growth without an Electron Acceptor.Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing.Impacts of Shewanella oneidensis c-type cytochromes on aerobic and anaerobic respiration NAD-dependent lactate dehydrogenase catalyses the first step in respiratory utilization of lactate by Lactococcus lactis Epithelial Coculture and l-Lactate Promote Growth of Helicobacter cinaedi under H2-Free Aerobic Conditions.

P2860

Q21093192-F5BE0457-D5DF-4D74-93D5-CF17F3219165 Q21131154-A31AC059-BE57-423F-824D-D5C9B6906EC4 Q27021881-F8EE5088-AB13-432A-90D2-C9B66E347483 Q28474659-CFDB027E-9E21-4889-9245-7424F4CD55DD Q28487955-A071BAF1-B6DF-471E-928A-E63535F9AA50 Q29346664-ED3AAF70-B4E8-43E3-9CBD-A5CE60D2344D Q29346669-619D31A9-69E8-4B2E-8FAD-3A0F4F9A6AB5 Q30388795-7EBB6151-143B-4433-BC20-10B0780237E1 Q31114294-B94E6903-A98F-447C-94A6-A349ECE94249 Q33560516-A7ACC13C-233C-429D-A7E2-42D5554F43F9 Q33631984-24E2F5AD-12BB-4F42-895A-BF2A0DD0CEB4 Q33691003-B3BB66E8-9E7B-4AA4-B90C-196A8FAF0CF1 Q33754388-0383C29D-DC16-4575-971E-D723DBBACBAD Q33964271-5880BD04-BBB0-4969-8D28-8997760B3605 Q34023092-F1777150-8E2A-4069-9A26-527986696C01 Q34058413-C5C77D4F-ADA0-4A19-9C8A-EF215705A7D3 Q34154678-BE9ED150-083C-406D-BE94-7B51BB3FABEA Q35081028-550EDDCF-2FA9-4A67-96EA-613AA7F56D2B Q35139019-DE23D2F1-AF91-407D-A5AB-96E3935BCAED Q35216161-A6A0EFBE-A615-4012-962F-900BF29A812C Q35590375-9BD47488-B29B-4760-9172-DCFEF61E4486 Q35599115-6C71B0A8-1423-4577-BA3C-95C4321C5494 Q35599212-08920C6B-1497-4BE7-8DBF-FAD26B7705E5 Q35616172-663E5577-B2B5-4004-975C-3ABFF9F6234A Q35665558-ACAC4BF8-76C5-438A-86D1-D1542FF5D597 Q35739173-54968A40-FAF2-4B23-A213-AD09AAF90EA3 Q35782934-07352EDF-2C7D-4478-9834-A022F6EB2CE6 Q35783615-7CA4E414-D8D1-4748-8546-CB7AF9293D10 Q35914065-40BCEF51-A132-4F32-914A-12552053A035 Q35956521-6BA9CAE7-7ED1-40FC-8335-66C43DD6F64A Q36180286-41FFB1BF-1011-4DFD-A178-82FE81E3112F Q36506224-1EF2509A-9D12-46E1-87B4-186F40793ED4 Q36574326-7486C01F-37FF-4DE7-9CF0-817D4DE6F2B7 Q36606954-3687BB26-5181-4A55-9773-5E40E543F691 Q36757270-B5166834-8867-4912-A64B-64F6CE71FE51 Q36878423-9578A125-A39C-4694-995E-42814B83B338 Q37191678-B3AC4B70-FE20-451D-A454-AA6E8E3087FE Q37274740-27ACD0AE-6A65-48B3-9FCB-15B27ED24B20 Q37289668-7C87B535-D126-457F-B5EC-3299BE235721 Q37378708-292009CF-B74B-456C-8283-24AD9EBFC22C

P2860

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.

http://www.wikidata.org/entity/Q37085738

description

article científic

@ca

article scientifique

@fr

articolo scientifico

@it

artigo científico

@pt

bilimsel makale

@tr

scientific article published on 05 February 2009

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Genomic reconstruction of Shew ...... inery for lactate utilization.

@en

Genomic reconstruction of Shew ...... inery for lactate utilization.

@nl

type

label

Genomic reconstruction of Shew ...... inery for lactate utilization.

@en

Genomic reconstruction of Shew ...... inery for lactate utilization.

@nl

prefLabel

Genomic reconstruction of Shew ...... inery for lactate utilization.

@en

Genomic reconstruction of Shew ...... inery for lactate utilization.

@nl

P1433

Q37085738-36AB131F-609F-45A0-97B0-3F9D8CD78176

P1476

Q37085738-2C8641B0-885A-41B7-9FEE-F80F3B7AFCF7

P2093

Q37085738-1108F8AE-F76A-4CB0-A9EC-8FADE7A5D013

Q37085738-2CBD112F-5FFB-4D1E-BA33-C71F05823880

Q37085738-3F7A9D2A-E078-42E6-B063-18841C7B38D5

Q37085738-4A7C1E56-C62B-4FC0-A8E5-7AFF9B6666EF

Q37085738-71EB0AB5-5275-4D75-AD1A-B1F5AA6148DE

Q37085738-77A4D3BF-A46F-4F7D-ADAF-DA41B9114112

Q37085738-83A02B9E-3AFC-425D-8580-8809A8094B47

Q37085738-8486A998-3C4C-4BFD-8437-6851DA21EC57

Q37085738-87C08C98-5B58-46BE-8145-670E4C0EC9B2

Q37085738-9F2DDEE9-CD45-47BB-A345-C9CD8F094013

P2860

Q37085738-060A62AF-6B15-473D-BA3C-708CD3916EAE

Q37085738-0997FEB6-E1E7-4CBF-AB40-61C8E30EBCF6

Q37085738-0EF58EE6-51AE-418A-83E3-57DA11B0FD07

Q37085738-115812C9-6415-44DD-BC32-7B742C469A2F

Q37085738-1368FA0B-0ED6-492F-B1B2-A90EB581D3C5

Q37085738-196218EE-A348-4120-A595-9D9143A33C00

Q37085738-263851F8-AB37-4C61-AA54-A4F50E2C135F

Q37085738-26714820-BDB3-42D7-A718-106ABDD1A8E2

Q37085738-27A455F8-AFF0-45FA-89AF-99E855BAB15A

Q37085738-2EF0F4D2-5C1B-47C4-945F-B3C359955515

P304

Q37085738-596DAA06-FED4-4E45-83EB-D2FF1BEA37B1

P31

Q37085738-EEC2A532-3B7A-4870-B802-F4EE3D05BD27

P356

Q37085738-C2469D0A-3A65-43CF-A89E-6870FE57F158

P407

Q37085738-41A0A8D7-9CA9-486F-A78E-ABAB4AA12F20

P433

Q37085738-B33FB427-847F-4DAB-8E1E-F7BD236FC2A1

P478

Q37085738-65B71A1D-1470-4E00-BEAC-65EB5E798814

P50

Q37085738-2EDFC481-0518-4B32-B2A6-6CD0CA8A82E3

Q37085738-7C2F23A0-B181-40D7-BA77-EBBDC2AA5A00

Q37085738-D6D68F48-5304-41F7-A959-E1C88CDCA5C0

P577

Q37085738-9B51422C-7961-4B9D-9538-F6F0704C293C

P5875

Q37085738-A9D03D74-6B55-4F7D-9AF9-7444006E499A

P698

Q37085738-287DAB52-CAC1-4AD1-B6FF-638FF92487D9

P932

Q37085738-C3C70511-DB14-42DD-90A1-C6CF71BC6F13

P356

PNAS.0806798106

P1433

Proceedings of the National Academy of Sciences of the United States of America

P1476

Genomic reconstruction of Shew ...... inery for lactate utilization.

@en

P2093

Alexander S Beliaev

http://www.w3.org/2001/XMLSchema#string

Andrei L Osterman

http://www.w3.org/2001/XMLSchema#string

Chen Yang

http://www.w3.org/2001/XMLSchema#string

Etienne Dervyn

http://www.w3.org/2001/XMLSchema#string

Grigory E Pinchuk

http://www.w3.org/2001/XMLSchema#string

James H Scott

http://www.w3.org/2001/XMLSchema#string

Jim K Fredrickson

http://www.w3.org/2001/XMLSchema#string

Oleg V Geydebrekht

http://www.w3.org/2001/XMLSchema#string

Samantha B Reed

http://www.w3.org/2001/XMLSchema#string

Xiaoqing Li

http://www.w3.org/2001/XMLSchema#string

P2860

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Identification of putative mammalian D-lactate dehydrogenase enzymes

Microbial cellulose utilization: fundamentals and biotechnology

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

Isolation of the DLD gene of Saccharomyces cerevisiae encoding the mitochondrial enzyme D-lactate ferricytochrome c oxidoreductase.

Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis.

Vibrio aerogenes sp. nov., a facultatively anaerobic marine bacterium that ferments glucose with gas production.

Transport of L-Lactate, D-Lactate, and glycolate by the LldP and GlcA membrane carriers of Escherichia coli.

The ion transporter superfamily.

Missing genes in metabolic pathways: a comparative genomics approach.

P304

2874-2879

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1073/PNAS.0806798106

http://www.w3.org/2001/XMLSchema#string

P407

P433

8

http://www.w3.org/2001/XMLSchema#string

P478

106

http://www.w3.org/2001/XMLSchema#string

P50

Margaret F Romine

Frank R. Collart

Dmitry Rodionov

P577

2009-02-05T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

23983342

http://www.w3.org/2001/XMLSchema#string

P698

19196979

http://www.w3.org/2001/XMLSchema#string

P932

2636740

http://www.w3.org/2001/XMLSchema#string