Global mapping of protein-DNA interactions in vivo by digital genomic footprinting. - Wikidata - awgldk - TriplyDB

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

http://www.wikidata.org/entity/Q37157318

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A user's guide to the encyclopedia of DNA elements (ENCODE)Current bioinformatic approaches to identify DNase I hypersensitive sites and genomic footprints from DNase-seq data Weakly positioned nucleosomes enhance the transcriptional competency of chromatin Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association Defining functional DNA elements in the human genome An integrated encyclopedia of DNA elements in the human genome EXTREME: an online EM algorithm for motif discovery The accessible chromatin landscape of the human genome High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data ENCODE whole-genome data in the UCSC genome browser (2011 update)YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities Epigenetic priors for identifying active transcription factor binding sites Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape Chromatin: constructing the big picture DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells Defining cell types and states with single-cell genomics Epigenomics and the structure of the living genome High-throughput sequencing for biology and medicine Super-enhancers: Asset management in immune cell genomes Identifying novel transcriptional components controlling energy metabolism Crystal Structure of Chiral γPNA with Complementary DNA Strand: Insights into the Stability and Specificity of Recognition and Conformational Preorganization Uniform transitions of the general RNA polymerase II transcription complex.The p23 molecular chaperone and GCN5 acetylase jointly modulate protein-DNA dynamics and open chromatin status Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.Genome-wide epigenomic profiling for biomarker discovery Protein-DNA binding in high-resolution Comprehensive mapping of long-range interactions reveals folding principles of the human genome Lagging-strand replication shapes the mutational landscape of the genome An expansive human regulatory lexicon encoded in transcription factor footprints The role of epigenetic mechanisms and processes in autoimmune disorders Genome-wide modeling of transcription preinitiation complex disassembly mechanisms using ChIP-chip data Quantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila development Evidence for a common evolutionary rate in metazoan transcriptional networks Interplay between chromatin state, regulator binding, and regulatory motifs in six human cell types Next-generation genomics: an integrative approach Correlation Between DNase I Hypersensitive Site Distribution and Gene Expression in HeLa S3 Cells Integrative analysis of 111 reference human epigenomes

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Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

http://www.wikidata.org/entity/Q37157318

description

article científic

@ca

article scientifique

@fr

articolo scientifico

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artigo científico

@pt

bilimsel makale

@tr

scientific article published on 22 March 2009

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@en

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@nl

type

label

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@en

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@nl

prefLabel

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@en

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

@nl

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Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

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Alex P Reynolds

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Jay R Hesselberth

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Michael S Kuehn

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Peter J Sabo

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Robert E Thurman

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Shane Neph

http://www.w3.org/2001/XMLSchema#string

Stanley Fields

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William S Noble

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Xiaoyu Chen

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Zhihong Zhang

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P2860

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

Sequencing and comparison of yeast species to identify genes and regulatory elements

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

Structure and function of the b/HLH/Z domain of USF

DNAse footprinting: a simple method for the detection of protein-DNA binding specificity

Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

Transcriptional regulatory code of a eukaryotic genome.

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

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283-289

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scholarly article

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10.1038/NMETH.1313

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4

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6

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Richard Sandstrom

John A Stamatoyannopoulos

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2009-03-22T00:00:00Z

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24218799

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19305407

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2668528

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