Haplotype block structure and its applications to association studies: power and study designs. - Wikidata - awgldk - TriplyDB

Haplotype block structure and its applications to association studies: power and study designs.

Haplotype block structure and its applications to association studies: power and study designs.

http://www.wikidata.org/entity/Q37204109

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Genetic variation in the progesterone receptor gene and ovarian cancer risk.Characterisation of the genomic architecture of human chromosome 17q and evaluation of different methods for haplotype block definition SNP haplotype tagging from DNA pools of two individuals htSNPer1.0: software for haplotype block partition and htSNPs selection.Assessing the power of tag SNPs in the mapping of quantitative trait loci (QTL) with extremal and random samples.Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium A model-based approach to selection of tag SNPs Haplotype block partition with limited resources and applications to human chromosome 21 haplotype data Haplotype block partitioning as a tool for dimensionality reduction in SNP association studies.Polymorphisms of the IGF1R gene and their genetic effects on chicken early growth and carcass traits.Cloud computing-based TagSNP selection algorithm for human genome data.Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies.Fine mapping functional sites or regions from case-control data using haplotypes of multiple linked SNPs.Accurate haplotype inference for multiple linked single-nucleotide polymorphisms using sibship data.A new method for detecting human recombination hotspots and its applications to the HapMap ENCODE data.Genetic associations in preterm birth: a primer of marker selection, study design, and data analysis.Selecting predictive markers for pharmacogenetic traits: tagging vs. data-mining approaches.Detecting susceptibility genes in case-control studies using set association Incorporating single-locus tests into haplotype cladistic analysis in case-control studies.Probability theory-based SNP association study method for identifying susceptibility loci and genetic disease models in human case-control data.Genetic variation in the serotonin 2A receptor and suicidal ideation in a sample of 270 Irish high-density schizophrenia families.Genome-wide association studies: progress and potential for drug discovery and development.Minimum description length block finder, a method to identify haplotype blocks and to compare the strength of block boundaries.Selection and evaluation of tagging SNPs in the neuronal-sodium-channel gene SCN1A: implications for linkage-disequilibrium gene mapping.The future of association studies: gene-based analysis and replication.Finding haplotype block boundaries by using the minimum-description-length principle.Haplotype kernel association test as a powerful method to identify chromosomal regions harboring uncommon causal variants.An entropy-based statistic for genomewide association studies.BLOCK-BASED BAYESIAN EPISTASIS ASSOCIATION MAPPING WITH APPLICATION TO WTCCC TYPE 1 DIABETES DATA.The effect of single-nucleotide polymorphism marker selection on patterns of haplotype blocks and haplotype frequency estimates Genome-wide definitive haplotypes determined using a collection of complete hydatidiform moles Androgen receptor cytosine, adenine, guanine repeats, and haplotypes in relation to ovarian cancer risk Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor.Nonparametric disequilibrium mapping of functional sites using haplotypes of multiple tightly linked single-nucleotide polymorphism markers.Rare BRCA1 haplotypes including 3'UTR SNPs associated with breast cancer risk.Genetic epidemiology, genetic maps and positional cloning.A nonsynonymous polymorphism of IRAK4 associated with increased prevalence of gram-positive infection and decreased response to toll-like receptor ligands A survey of haplotype variants at several disease candidate genes: the importance of rare variants for complex diseases.Will haplotype maps be useful for finding genes?Multipoint linkage-disequilibrium mapping with haplotype-block structure.

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P2860

Haplotype block structure and its applications to association studies: power and study designs.

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American Journal of Human Genetics

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Haplotype block structure and ...... dies: power and study designs.

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Fengzhu Sun

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Kui Zhang

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Magnus Nordborg

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Peter Calabrese

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P2860

Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM)

The TDT and other family-based tests for linkage disequilibrium and association

A New Statistical Method for Haplotype Reconstruction from Population Data

The structure of haplotype blocks in the human genome

The future of genetic studies of complex human diseases

Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population

Linkage disequilibrium in the human genome

Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

A dynamic programming algorithm for haplotype block partitioning.

Transmission/disequilibrium tests using multiple tightly linked markers.

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10.1086/344780

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12439824

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