A quantitative model of transcription factor-activated gene expression.
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Predicting gene-regulation functions: lessons from temperate bacteriophagesDynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanismProtein sequestration generates a flexible ultrasensitive response in a genetic networkControl of relative timing and stoichiometry by a master regulatorRescuing loading induced bone formation at senescenceDe novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysisHIV promoter integration site primarily modulates transcriptional burst size rather than frequencyEffect of promoter architecture on the cell-to-cell variability in gene expressionA linear framework for time-scale separation in nonlinear biochemical systemsThe biological microprocessor, or how to build a computer with biological partsSingle cell analysis of RNA-mediated histone H3.3 recruitment to a cytomegalovirus promoter-regulated transcription site.Signal-dependent dynamics of transcription factor translocation controls gene expression.Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression DataMonte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm NetworkOn the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter.Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration.Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneityOcclusion of regulatory sequences by promoter nucleosomes in vivoContribution of transcription factor binding site motif variants to condition-specific gene expression patterns in budding yeastStochastic modeling for the expression of a gene regulated by competing transcription factors.Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast.Bacterial nucleoid-associated protein uncouples transcription levels from transcription timing.Saccharomyces cerevisiae Sen1 as a model for the study of mutations in human Senataxin that elicit cerebellar ataxia.Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction.Nucleosome-mediated cooperativity between transcription factors.The effect of an intervening promoter nucleosome on gene expression.A framework for modelling gene regulation which accommodates non-equilibrium mechanisms.Linking stochastic fluctuations in chromatin structure and gene expression.From DNA sequence to transcriptional behaviour: a quantitative approachDynamics of nucleosome invasion by DNA binding proteins.Transcription by the numbers redux: experiments and calculations that surprise.A systems view of the protein expression process.Multiplex Eukaryotic Transcription (In)activation: Timing, Bursting and Cycling of a Ratchet Clock MechanismChromatin accessibility at the HIV LTR promoter sets a threshold for NF-κB mediated viral gene expressionThe Role of Genome Accessibility in Transcription Factor Binding in Bacteria.Transcription stochasticity of complex gene regulation models.Affinity and competition for TBP are molecular determinants of gene expression noise.Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expressionDifferential binding of the related transcription factors Pho4 and Cbf1 can tune the sensitivity of promoters to different levels of an induction signal.Eukaryotic transcriptional dynamics: from single molecules to cell populations.
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A quantitative model of transcription factor-activated gene expression.
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
@pt
bilimsel makale
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scientific article published on 12 October 2008
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
A quantitative model of transcription factor-activated gene expression.
@en
A quantitative model of transcription factor-activated gene expression.
@nl
type
label
A quantitative model of transcription factor-activated gene expression.
@en
A quantitative model of transcription factor-activated gene expression.
@nl
prefLabel
A quantitative model of transcription factor-activated gene expression.
@en
A quantitative model of transcription factor-activated gene expression.
@nl
P2860
P356
P1476
A quantitative model of transcription factor-activated gene expression.
@en
P2093
Erin K O'Shea
Harold D Kim
P2860
P2888
P304
P356
10.1038/NSMB.1500
P577
2008-10-12T00:00:00Z