Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.
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Recognition of RNA duplexes by chemically modified triplex-forming oligonucleotidesHIV-1 frameshift efficiency is primarily determined by the stability of base pairs positioned at the mRNA entrance channel of the ribosomeNew Perspectives on DNA and RNA Triplexes As Effectors of Biological ActivityRibosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious useUnique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targetsEnsemble simulations: folding, unfolding and misfolding of a high-efficiency frameshifting RNA pseudoknotAn intermolecular RNA triplex provides insight into structural determinants for the pseudoknot stimulator of -1 ribosomal frameshifting.Directional mechanical stability of Bacteriophage φ29 motor's 3WJ-pRNA: Extraordinary robustness along portal axisCoordination among tertiary base pairs results in an efficient frameshift-stimulating RNA pseudoknot.RNA pseudoknots: folding and finding.Stimulation of -1 programmed ribosomal frameshifting by a metabolite-responsive RNA pseudoknotStimulation of ribosomal frameshifting by antisense LNAThe ribosome uses two active mechanisms to unwind messenger RNA during translationRNA reactions one molecule at a timeRPI-Pred: predicting ncRNA-protein interaction using sequence and structural informationAbsence of knots in known RNA structures.Revealing -1 programmed ribosomal frameshifting mechanisms by single-molecule techniques and computational methodsNanomanipulation of single RNA molecules by optical tweezers.Spacer-length dependence of programmed -1 or -2 ribosomal frameshifting on a U6A heptamer supports a role for messenger RNA (mRNA) tension in frameshifting.Programmed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfoldingRNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus.A genome-wide analysis of RNA pseudoknots that stimulate efficient -1 ribosomal frameshifting or readthrough in animal virusesFolding a stable RNA pseudoknot through rearrangement of two hairpin structures.Potential in vivo roles of nucleic acid triple-helices.RNA triplexes: from structural principles to biological and biotech applications.Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.Stem-loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting.A review on architecture of the gag-pol ribosomal frameshifting RNA in human immunodeficiency virus: a variability survey of virus genotypes.Stability of RNA quadruplex in open reading frame determines proteolysis of human estrogen receptor α.Conformational Dynamics of mRNA in Gene Expression as New Pharmaceutical Target.Mechanical unfolding kinetics of the SRV-1 gag-pro mRNA pseudoknot: possible implications for -1 ribosomal frameshifting stimulation.mRNA pseudoknot structures can act as ribosomal roadblocks.Pseudoknots in RNA folding landscapes.Functional analysis of the SRV-1 RNA frameshifting pseudoknot.On programmed ribosomal frameshifting: the alternative proteomes.Salt Effects on the Thermodynamics of a Frameshifting RNA Pseudoknot under Tension.Single-molecule measurements of the CCR5 mRNA unfolding pathways.Stimulation of ribosomal frameshifting by RNA G-quadruplex structures.Conformational dynamics of the frameshift stimulatory structure in HIV-1.A domain-based model for predicting large and complex pseudoknotted structures.
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P2860
Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 23 July 2009
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@en
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@nl
type
label
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@en
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@nl
prefLabel
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@en
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@nl
P2093
P2860
P356
P1476
Triplex structures in an RNA p ...... of -1 ribosomal frameshifting.
@en
P2093
Ignacio Tinoco
Kung-Yao Chang
Ming-Yuan Chou
P2860
P304
12706-12711
P356
10.1073/PNAS.0905046106
P407
P577
2009-07-23T00:00:00Z