MotifMap: a human genome-wide map of candidate regulatory motif sites
about
Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility dataBile Acids, FXR, and Metabolic Effects of Bariatric SurgeryBioinformatics and Drug Discovery.TranscriptomeBrowser 3.0: introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks.Genome-wide in silico prediction of gene expression.Prediction and experimental validation of novel STAT3 target genes in human cancer cellsData sources for in vivo molecular profiling of human phenotypes.A map of open chromatin in human pancreatic islets.Partitioning circadian transcription by SIRT6 leads to segregated control of cellular metabolism.A ChIP-Seq benchmark shows that sequence conservation mainly improves detection of strong transcription factor binding sites.Genome-wide identification of Bcl11b gene targets reveals role in brain-derived neurotrophic factor signaling.MotifMap: integrative genome-wide maps of regulatory motif sites for model species.A combination of computational and experimental approaches identifies DNA sequence constraints associated with target site binding specificity of the transcription factor CSL.Differences in local genomic context of bound and unbound motifs.Metabolism and the circadian clock converge.GRHL3/GET1 and trithorax group members collaborate to activate the epidermal progenitor differentiation program.Cell-type specificity of ChIP-predicted transcription factor binding sitesUsing potential master regulator sites and paralogous expansion to construct tissue-specific transcriptional networks.Prediction and experimental characterization of nsSNPs altering human PDZ-binding motifs.Tissue-specific prediction of directly regulated genesIdentifying functional single nucleotide polymorphisms in the human CArGomeRetrotransposon profiling of RNA polymerase III initiation sites.Coordination of the transcriptome and metabolome by the circadian clock.Dissecting the regulatory architecture of gene expression QTLs.Artificially designed promoters: understanding the role of spatial features and canonical binding sites in transcription.Computational Identification of Genomic Features That Influence 3D Chromatin Domain FormationReprogramming of the circadian clock by nutritional challenge.The pervasiveness and plasticity of circadian oscillations: the coupled circadian-oscillators frameworkDnmt3a Is a Haploinsufficient Tumor Suppressor in CD8+ Peripheral T Cell Lymphoma.Most of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules.9-cis retinoic acid is the ALDH1A1 product that stimulates melanogenesis.PRISM offers a comprehensive genomic approach to transcription factor function predictionWNT4 mediates estrogen receptor signaling and endocrine resistance in invasive lobular carcinoma cell lines.Cycles in spatial and temporal chromosomal organization driven by the circadian clock.Single nucleotide polymorphisms of the haptoglobin gene in non-small cell lung cancer treated with personalized peptide vaccination.MotifMap-RNA: a genome-wide map of RBP binding sites.A comparative analysis of DNA methylation across human embryonic stem cell lines.Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription.Tracing the evolution of lineage-specific transcription factor binding sites in a birth-death frameworkThe Ink4a/Arf locus operates as a regulator of the circadian clock modulating RAS activity.
P2860
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P2860
MotifMap: a human genome-wide map of candidate regulatory motif sites
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh
2008年學術文章
@zh-hant
name
MotifMap: a human genome-wide map of candidate regulatory motif sites
@en
MotifMap: a human genome-wide map of candidate regulatory motif sites.
@nl
type
label
MotifMap: a human genome-wide map of candidate regulatory motif sites
@en
MotifMap: a human genome-wide map of candidate regulatory motif sites.
@nl
prefLabel
MotifMap: a human genome-wide map of candidate regulatory motif sites
@en
MotifMap: a human genome-wide map of candidate regulatory motif sites.
@nl
P2860
P356
P1433
P1476
MotifMap: a human genome-wide map of candidate regulatory motif sites
@en
P2093
Paul Rigor
Xiaohui Xie
P2860
P304
P356
10.1093/BIOINFORMATICS/BTN605
P407
P50
P577
2008-11-18T00:00:00Z