Codon influence on protein expression in E. coli correlates with mRNA levels. - Wikidata - awgldk - TriplyDB

Codon influence on protein expression in E. coli correlates with mRNA levels.

Codon influence on protein expression in E. coli correlates with mRNA levels.

http://www.wikidata.org/entity/Q37319891

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The organization and regulation of mRNA-protein complexes High-throughput recombinant protein expression in Escherichia coli: current status and future perspectives Avoidance of stochastic RNA interactions can be harnessed to control protein expression levels in bacteria and archaea Codon usage regulates protein structure and function by affecting translation elongation speed in Drosophila cells.Single-mutation fitness landscapes for an enzyme on multiple substrates reveal specificity is globally encoded The Selective Advantage of Synonymous Codon Usage Bias in Salmonella.Analysis of the association between codon optimality and mRNA stability in Schizosaccharomyces pombe.The link between adjacent codon pairs and mRNA stability.Codon usage is an important determinant of gene expression levels largely through its effects on transcription.Operon mRNAs are organized into ORF-centric structures that predict translation efficiency.Machine learning in computational biology to accelerate high-throughput protein expression.Cis-regulatory elements explain most of the mRNA stability variation across genes in yeast.Population Genomics of Paramecium Species.Case for the genetic code as a triplet of triplets.When mRNA translation meets decay.The ribosome in action: Tuning of translational efficiency and protein folding.The Yin and Yang of Codon Usage.Synonymous Codons: Choose Wisely for Expression.The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality Cooperation between the chloroplast psbA 5'-untranslated region and coding region is important for translational initiation: the chloroplast translation machinery cannot read a human viral gene coding region.Improving heterologous membrane protein production in Escherichia coli by combining transcriptional tuning and codon usage algorithms.Predicting synonymous codon usage and optimizing the heterologous gene for expression in E. coli.The development of fluorescent protein tracing vectors for multicolor imaging of clinically isolated Staphylococcus aureus.A code within a code: how codons influence mRNA stability.Codon identity regulates mRNA stability and translation efficiency during the maternal-to-zygotic transition.A Universal Code for mRNA Stability?Et tu, Brute? Not Even Intracellular Mutualistic Symbionts Escape Horizontal Gene Transfer.Metabolic Engineering of Escherichia coli for Producing Astaxanthin as the Predominant Carotenoid.Effects of mRNA secondary structure on the expression of HEV ORF2 proteins in Escherichia coli.Quantitating translational control: mRNA abundance-dependent and independent contributions and the mRNA sequences that specify them.Probing instructions for expression regulation in gene nucleotide compositions."Lost in translation: Seeing the forest by focusing on the trees".Integrated analysis of individual codon contribution to protein biosynthesis reveals a new approach to improving the basis of rational gene design.Codon optimality, bias and usage in translation and mRNA decay.Codon-Resolution Analysis Reveals a Direct and Context-Dependent Impact of Individual Synonymous Mutations on mRNA Level.Genome evolution is driven by gene expression-generated biophysical constraints through RNA-directed genetic variation: A hypothesis.The impact of ribosomal interference, codon usage, and exit tunnel interactions on translation elongation rate variation.Engineering carboxypeptidase G2 circular permutations for the design of an autoinhibited enzyme.RNA Structural Determinants of Optimal Codons Revealed by MAGE-Seq.Codon Clarity or Conundrum?

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Codon influence on protein expression in E. coli correlates with mRNA levels.

http://www.wikidata.org/entity/Q37319891

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article científic

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article scientifique

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articolo scientifico

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artigo científico

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bilimsel makale

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scientific article published on 13 January 2016

@en

vedecký článok

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vetenskaplig artikel

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videnskabelig artikel

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vědecký článek

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name

Codon influence on protein expression in E. coli correlates with mRNA levels.

@en

Codon influence on protein expression in E. coli correlates with mRNA levels.

@nl

type

label

Codon influence on protein expression in E. coli correlates with mRNA levels.

@en

Codon influence on protein expression in E. coli correlates with mRNA levels.

@nl

prefLabel

Codon influence on protein expression in E. coli correlates with mRNA levels.

@en

Codon influence on protein expression in E. coli correlates with mRNA levels.

@nl

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Codon influence on protein expression in E. coli correlates with mRNA levels.

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Daniel P Aalberts

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Grégory Boël

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Helen Neely

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John F Hunt

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John K Everett

http://www.w3.org/2001/XMLSchema#string

Jon Luff

http://www.w3.org/2001/XMLSchema#string

Kam-Ho Wong

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Mayank Valecha

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Min Su

http://www.w3.org/2001/XMLSchema#string

Reka Letso

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P2860

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

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A new look at the statistical model identification

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

Dom34:Hbs1 promotes subunit dissociation and peptidyl-tRNA drop-off to initiate no-go decay.

The high-throughput protein sample production platform of the Northeast Structural Genomics Consortium.

Preparation of protein samples for NMR structure, function, and small-molecule screening studies

Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome.

Differential translation tunes uneven production of operon-encoded proteins.

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358-363

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scholarly article

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10.1038/NATURE16509

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7586

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529

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Gaetano T. Montelione

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2016-01-13T00:00:00Z

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26760206

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Escherichia coli

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5054687

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