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Quantitative PCR for genetic markers of human fecal pollution.

Quantitative PCR for genetic markers of human fecal pollution.

http://www.wikidata.org/entity/Q37333217

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Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities Microbial source tracking markers for detection of fecal contamination in environmental waters: relationships between pathogens and human health outcomes U.S. Recreational Water Quality Criteria: A Vision for the Future Performance of two quantitative PCR methods for microbial source tracking of human sewage and implications for microbial risk assessment in recreational waters Enterococci in the environment Microbial Source Tracking in Adjacent Karst Springs Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods.Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples.Biotic interactions and sunlight affect persistence of fecal indicator bacteria and microbial source tracking genetic markers in the upper Mississippi river.State of the art molecular markers for fecal pollution source tracking in water.A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of Lake Michigan Lachnospiraceae and Bacteroidales alternative fecal indicators reveal chronic human sewage contamination in an urban harbor Hypothesis-driven approach for the identification of fecal pollution sources in water resources.Decay of bacterial pathogens, fecal indicators, and real-time quantitative PCR genetic markers in manure-amended soils Use of an exogenous plasmid standard and quantitative PCR to monitor spatial and temporal distribution of Enterococcus spp. in beach sands.Genetic markers for rapid PCR-based identification of gull, Canada goose, duck, and chicken fecal contamination in water.Identification of Specialists and Abundance-Occupancy Relationships among Intestinal Bacteria of Aves, Mammalia, and Actinopterygii.Distributions of Fecal Markers in Wastewater from Different Climatic Zones for Human Fecal Pollution Tracking in Australian Surface Waters.The Development of a Novel qPCR Assay-Set for Identifying Fecal Contamination Originating from Domestic Fowls and Waterfowl in Israel.Simultaneous quantification of multiple food- and waterborne pathogens by use of microfluidic quantitative PCR Use of Bacteroidales microbial source tracking to monitor fecal contamination in fresh produce production.Faecal pollution along the southeastern coast of Florida and insight into the use of pepper mild mottle virus as an indicator.Distribution and Differential Survival of Traditional and Alternative Indicators of Fecal Pollution at Freshwater Beaches A case study characterizing animal fecal sources in surface water using a mitochondrial DNA marker.A combination of PhP typing and β-d-glucuronidase gene sequence variation analysis for differentiation of Escherichia coli from humans and animals.Comparison of four polymerase chain reaction methods for the rapid detection of human fecal pollution in marine and inland waters Exposure to human-associated fecal indicators and self-reported illness among swimmers at recreational beaches: a cohort study.Bacterial hand contamination among Tanzanian mothers varies temporally and following household activities.Evaluation of the host specificity of Bacteroides thetaiotaomicron alpha-1-6, mannanase gene as a sewage marker.Chicken- and duck-associated Bacteroides-Prevotella genetic markers for detecting fecal contamination in environmental water.Differential decay of human faecal Bacteroides in marine and freshwater.Use of a genetically-engineered Escherichia coli strain as a sample process control for quantification of the host-specific bacterial genetic markers.Current Status of Marker Genes of Bacteroides and Related Taxa for Identifying Sewage Pollution in Environmental Waters

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Quantitative PCR for genetic markers of human fecal pollution.

http://www.wikidata.org/entity/Q37333217

description

article científic

@ca

article scientifique

@fr

articolo scientifico

@it

artigo científico

@pt

bilimsel makale

@tr

scientific article published on 10 July 2009

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Quantitative PCR for genetic markers of human fecal pollution.

@en

Quantitative PCR for genetic markers of human fecal pollution.

@nl

type

label

Quantitative PCR for genetic markers of human fecal pollution.

@en

Quantitative PCR for genetic markers of human fecal pollution.

@nl

prefLabel

Quantitative PCR for genetic markers of human fecal pollution.

@en

Quantitative PCR for genetic markers of human fecal pollution.

@nl

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Applied and Environmental Microbiology

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Quantitative PCR for genetic markers of human fecal pollution.

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Catherine A Kelty

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Manju Varma

http://www.w3.org/2001/XMLSchema#string

Mano Sivaganesan

http://www.w3.org/2001/XMLSchema#string

Richard A Haugland

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P2860

A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis

Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation

Microbial source tracking: current methodology and future directions

Diversity of the human intestinal microbial flora

Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water

A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions

Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83

A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards.

Comparative analysis of human gut microbiota by barcoded pyrosequencing

Estimation of the relative abundance of different Bacteroides and Prevotella ribotypes in gut samples by restriction enzyme profiling of PCR-amplified 16S rRNA gene sequences.

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5507-5513

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scholarly article

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10.1128/AEM.00305-09

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17

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75

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19592537

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2737920

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