Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
about
Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNAStructure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNAMolecular dynamics of a kappaB DNA element: base flipping via cross-strand intercalative stacking in a microsecond-scale simulationIn the absence of writhe, DNA relieves torsional stress with localized, sequence-dependent structural failure to preserve B-formCharacterizing structural transitions using localized free energy landscape analysisBase-pair opening and bubble transport in a DNA double helix induced by a protein molecule in a viscous medium.Metadynamics simulation study on the conformational transformation of HhaI methyltransferase: an induced-fit base-flipping hypothesisUnderstanding the origins of bacterial resistance to aminoglycosides through molecular dynamics mutational study of the ribosomal A-site.Low-frequency normal mode in DNA HhaI methyltransferase and motions of residues involved in the base flipping.A molecular dynamics study of slow base flipping in DNA using conformational floodingBiophysical studies of DNA modified with conformationally constrained nucleotides: comparison of 2'-exo (north) and 3'-exo (south) 'locked' templatesConserved patterns in backbone torsional changes allow for single base flipping from duplex DNA with minimal distortion of the double helixStructure and substrate recognition of the Escherichia coli DNA adenine methyltransferaseElucidating molecular motion through structural and dynamic filters of energy-minimized conformer ensemblesMolecular dynamics simulations and free energy calculations of base flipping in dsRNA.Direct observation of cytosine flipping and covalent catalysis in a DNA methyltransferase.Base Flipping
P2860
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P2860
Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on 23 July 2004
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Caught in the act: visualizati ...... uced by HhaI methyltransferase
@en
Caught in the act: visualizati ...... ced by HhaI methyltransferase.
@nl
type
label
Caught in the act: visualizati ...... uced by HhaI methyltransferase
@en
Caught in the act: visualizati ...... ced by HhaI methyltransferase.
@nl
prefLabel
Caught in the act: visualizati ...... uced by HhaI methyltransferase
@en
Caught in the act: visualizati ...... ced by HhaI methyltransferase.
@nl
P2093
P2860
P50
P356
P1476
Caught in the act: visualizati ...... uced by HhaI methyltransferase
@en
P2093
Gary Ratner
Martin A Maier
Victor E Marquez
Xiaodong Cheng
Yongseok Choi
P2860
P304
P356
10.1093/NAR/GKH701
P407
P577
2004-07-23T00:00:00Z