Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli. - Wikidata - awgldk - TriplyDB

Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli.

Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli.

http://www.wikidata.org/entity/Q37394514

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Comparative genomic analysis of the genus Staphylococcus including Staphylococcus aureus and its newly described sister species Staphylococcus simiae Comparison of 61 sequenced Escherichia coli genomes Whole-genome phylogeny of Escherichia coli/Shigella group by feature frequency profiles (FFPs)Future perspectives, applications and challenges of genomic epidemiology studies for food-borne pathogens: A case study of Enterohemorrhagic Escherichia coli (EHEC) of the O157:H7 serotype Consequences of genomic diversity in Mycobacterium tuberculosis Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing?The enteropathogenic E. coli (EPEC) Tir effector inhibits NF-κB activity by targeting TNFα receptor-associated factors Emergence of a globally dominant IncHI1 plasmid type associated with multiple drug resistant typhoid Genomic diversity of Escherichia isolates from diverse habitats Genetic characterization of atypical Citrobacter freundii Directed evaluation of enterotoxigenic Escherichia coli autotransporter proteins as putative vaccine candidates.Evolution of atypical enteropathogenic E. coli by repeated acquisition of LEE pathogenicity island variants.Comparative Genomics Provides Insight into the Diversity of the Attaching and Effacing Escherichia coli Virulence Plasmids.Defining the phylogenomics of Shigella species: a pathway to diagnostics The role of lymphostatin/EHEC factor for adherence-1 in the pathogenesis of gram negative infection Genome sequence of the Shiga toxin-producing Escherichia coli strain NCCP15657.Phylogenetic and molecular analysis of food-borne shiga toxin-producing Escherichia coli.Evolution of enterohemorrhagic escherichia coli O26 based on single-nucleotide polymorphisms.Shiga toxin-producing Escherichia coli O157 is more likely to lead to hospitalization and death than non-O157 serogroups--except O104 Comparative genomics to delineate pathogenic potential in non-O157 Shiga toxin-producing Escherichia coli (STEC) from patients with and without haemolytic uremic syndrome (HUS) in Norway.Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages Genomic Comparison of Two O111:H- Enterohemorrhagic Escherichia coli Isolates from a Historic Hemolytic-Uremic Syndrome Outbreak in Australia.Antibiotic Resistance, Core-Genome and Protein Expression in IncHI1 Plasmids in Salmonella Typhimurium A comprehensive proteomic analysis of the type III secretome of Citrobacter rodentium.StrainSeeker: fast identification of bacterial strains from raw sequencing reads using user-provided guide trees.NleC, a type III secretion protease, compromises NF-κB activation by targeting p65/RelA Induction and identification of disulfide-intact and disulfide-reduced β-subunit of Shiga toxin 2 from Escherichia coli O157:H7 using MALDI-TOF-TOF-MS/MS and top-down proteomics.Identification of protective and broadly conserved vaccine antigens from the genome of extraintestinal pathogenic Escherichia coli Virulence gene profiling of enterohemorrhagic (EHEC) and enteropathogenic (EPEC) Escherichia coli strains: a basis for molecular risk assessment of typical and atypical EPEC strains.Whole genome sequence comparison of vtx2-converting phages from Enteroaggregative Haemorrhagic Escherichia coli strains.Screening of an E. coli O157:H7 Bacterial Artificial Chromosome Library by Comparative Genomic Hybridization to Identify Genomic Regions Contributing to Growth in Bovine Gastrointestinal Mucus and Epithelial Cell Colonization Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011 Characterization of enterohemorrhagic Escherichia coli O111 and O157 strains isolated from outbreak patients in Japan Identification of a novel prophage regulator in Escherichia coli controlling the expression of type III secretion.High temperature in combination with UV irradiation enhances horizontal transfer of stx2 gene from E. coli O157:H7 to non-pathogenic E. coli.The highly virulent 2006 Norwegian EHEC O103:H25 outbreak strain is related to the 2011 German O104:H4 outbreak strain.Phylogenetic incongruence in E. coli O104: understanding the evolutionary relationships of emerging pathogens in the face of homologous recombination.Lysogeny with Shiga toxin 2-encoding bacteriophages represses type III secretion in enterohemorrhagic Escherichia coli.A comparison of Shiga-toxin 2 bacteriophage from classical enterohemorrhagic Escherichia coli serotypes and the German E. coli O104:H4 outbreak strain.

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Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli.

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scientific article published on 06 October 2009

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Comparative genomics reveal th ...... ohemorrhagic Escherichia coli.

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Comparative genomics reveal th ...... ohemorrhagic Escherichia coli.

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Comparative genomics reveal th ...... ohemorrhagic Escherichia coli.

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Comparative genomics reveal th ...... ohemorrhagic Escherichia coli.

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PNAS.0903585106

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Proceedings of the National Academy of Sciences of the United States of America

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Comparative genomics reveal th ...... ohemorrhagic Escherichia coli.

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Atsushi Iguchi

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Hidehiro Toh

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Hiroyuki Abe

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Keisuke Nakayama

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Ken Kurokawa

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Kenshiro Oshima

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Masahira Hattori

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Md Asadulghani

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Tadasuke Ooka

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Tetsuya Hayashi

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P2860

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

Lateral gene transfer and the nature of bacterial innovation

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

Automated finishing with autofinish

Cluster analysis and display of genome-wide expression patterns

Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult

An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination

Rfam: an RNA family database

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

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10.1073/PNAS.0903585106

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19815525

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Escherichia coli

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