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Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious useTranslation of 5' leaders is pervasive in genes resistant to eIF2 repressionZFAS1: a long noncoding RNA associated with ribosomes in breast cancer cells.Computational approach for calculating the probability of eukaryotic translation initiation from ribo-seq data that takes into account leaky scanning.The use of duplex-specific nuclease in ribosome profiling and a user-friendly software package for Ribo-seq data analysis.RiboGalaxy: A browser based platform for the alignment, analysis and visualization of ribosome profiling data.Global and cell-type specific properties of lincRNAs with ribosome occupancy.Ribosome profiling reveals the what, when, where and how of protein synthesisAdjustments, extinction, and remains of selenocysteine incorporation machinery in the nematode lineage.Insights into the mechanisms of eukaryotic translation gained with ribosome profilingPROTEOFORMER: deep proteome coverage through ribosome profiling and MS integrationCis-Acting Sequence Elements and Upstream Open Reading Frame in Mouse Utrophin-A 5'-UTR Repress Cap-Dependent TranslationThe generation of knock-in mice expressing fluorescently tagged galanin receptors 1 and 2.Identification of long non-coding transcripts with feature selection: a comparative study.Simple and inexpensive ribosome profiling analysis of mRNA translation.RPFdb: a database for genome wide information of translated mRNA generated from ribosome profiling.Death of a dogma: eukaryotic mRNAs can code for more than one protein.Integrated in vivo and in vitro nascent chain profiling reveals widespread translational pausing.Comprehensive translational control of tyrosine kinase expression by upstream open reading frames.Ribosome reinitiation at leader peptides increases translation of bacterial proteins.Systematic analysis of the PTEN 5' leader identifies a major AUU initiated proteoform.Translational control of immune responses: from transcripts to translatomes.Computational analysis of nascent peptides that induce ribosome stalling and their proteomic distribution in Saccharomyces cerevisiae.Transcriptional regulation of long-term potentiation.Unconventional Targeting of a Thiol Peroxidase to the Mitochondrial Intermembrane Space Facilitates Oxidative Protein Folding.Antisense transcription of the myotonic dystrophy locus yields low-abundant RNAs with and without (CAG)n repeat.Mining for Micropeptides.Small proteins encoded by unannotated ORFs are rising stars of the proteome, confirming shortcomings in genome annotations and current vision of an mRNA.Autoregulation of the tufB operon in Salmonella.GWIPS-viz as a tool for exploring ribosome profiling evidence supporting the synthesis of alternative proteoforms.A comparative genomics study on the effect of individual amino acids on ribosome stalling.RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis.Ribosome Footprint Profiling of Translation throughout the Genome.A bacterial homolog YciH of eukaryotic translation initiation factor eIF1 regulates stress-related gene expression and is unlikely to be involved in translation initiation fidelity.riboviz: analysis and visualization of ribosome profiling datasets.ASXL gain-of-function truncation mutants: defective and dysregulated forms of a natural ribosomal frameshifting product?Ribosome profiling: new views of translation, from single codons to genome scale.Discovery of noncanonical translation initiation sites through mass spectrometric analysis of protein N termini.TranslatomeDB: a comprehensive database and cloud-based analysis platform for translatome sequencing data.Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins.
P2860
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P2860
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 31 October 2013
@en
vedecký článok
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vetenskaplig artikel
@sv
videnskabelig artikel
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vědecký článek
@cs
name
GWIPS-viz: development of a ribo-seq genome browser.
@en
GWIPS-viz: development of a ribo-seq genome browser.
@nl
type
label
GWIPS-viz: development of a ribo-seq genome browser.
@en
GWIPS-viz: development of a ribo-seq genome browser.
@nl
prefLabel
GWIPS-viz: development of a ribo-seq genome browser.
@en
GWIPS-viz: development of a ribo-seq genome browser.
@nl
P2093
P2860
P50
P356
P1476
GWIPS-viz: development of a ribo-seq genome browser.
@en
P2093
Anmol M Kiran
Christof De Bo
Claire A Donohue
Gearoid Fox
James P A Mullan
Patrick B F O'Connor
Stephen M Heaphy
P2860
P304
P356
10.1093/NAR/GKT1035
P407
P433
Database issue
P577
2013-10-31T00:00:00Z