Higher order structural elements in ribosomal RNAs: pseudo-knots and the use of noncanonical pairs.
about
Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"RNA misfolding and the action of chaperonesEvolutionary rates vary among rRNA structural elementsPhylogenetic analysis of Metabacterium polyspora: clues to the evolutionary origin of daughter cell production in Epulopiscium species, the largest bacteriaSequence and structural elements at the 3' terminus of bovine viral diarrhea virus genomic RNA: functional role during RNA replicationThermodynamic characterization of tandem mismatches found in naturally occurring RNATowards a computational model of a methane producing archaeumIncorporating phylogenetic-based covarying mutations into RNAalifold for RNA consensus structure predictionSecondary structure and domain architecture of the 23S and 5S rRNAsStructural constraints identified with covariation analysis in ribosomal RNAMolecular signatures of ribosomal evolutionIdentifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods.Correlation of RNA secondary structure statistics with thermodynamic stability and applications to folding.An rRNA fragment and its antisense can alter decoding of genetic informationModels of the primary and secondary structure for the 12S rRNA of birds: a guideline for sequence alignment.MARNA: multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons.The impact of recent improvements in cryo-electron microscopy technology on the understanding of bacterial ribosome assembly.From structure prediction to genomic screens for novel non-coding RNAs.Covariance of complementary rRNA loop nucleotides does not necessarily represent functional pseudoknot formation in vivo.Staphylococcus aureus domain V functions in Escherichia coli ribosomes provided a conserved interaction with domain IV is restoredDomain I of 23S rRNA competes with a paused transcription complex for ribosomal protein L4 of Escherichia coli.Selective optimization of the Rev-binding element of HIV-1.Requirement for a conserved, tertiary interaction in the core of 23S ribosomal RNA.Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejanaSelecting rRNA binding sites for the ribosomal proteins L4 and L6 from randomly fragmented rRNA: application of a method called SERFPseudoknot in the central domain of small subunit ribosomal RNA is essential for translation.An overview of the secondary structure of the V4 region of eukaryotic small-subunit ribosomal RNA.A computer method for finding common base paired helices in aligned sequences: application to the analysis of random sequences.Phylogenetic and molecular characterization of a 23S rRNA gene positions the genus Campylobacter in the epsilon subdivision of the Proteobacteria and shows that the presence of transcribed spacers is common in Campylobacter spp.The phylogenetically conserved doublet tertiary interaction in domain III of the large subunit rRNA is crucial for ribosomal protein bindingPhylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park.Mutations in twinstar, a Drosophila gene encoding a cofilin/ADF homologue, result in defects in centrosome migration and cytokinesis.Crystallization of ribozymes and small RNA motifs by a sparse matrix approach.Higher order interactions in 23s rRNA.Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.A phylogenetic analysis of the myxobacteria: basis for their classification.Detection of a key tertiary interaction in the highly conserved GTPase center of large subunit ribosomal RNA.Ten lessons with Carl Woese about RNA and comparative analysis.An introduction to recurrent nucleotide interactions in RNA.Domain V of 23S rRNA contains all the structural elements necessary for recognition by the ErmE methyltransferase
P2860
Q24556605-A4724491-7CAB-409E-8FCB-8E60FDA6C9A4Q24656891-971AF870-1310-47C8-A4EB-6F48DAF80101Q24682434-56B5FAD5-1C33-448B-9265-95BC9ADB340EQ24684480-18D6E60F-6CF5-44BA-BB03-ED709CA8BC74Q27469357-B9E21518-E8D6-4CF3-863A-4EC4BA55DCDAQ27489115-4C6C50D9-3402-4715-8E50-EE0D12FCE9DFQ28657421-53A03B0F-DA13-46DD-9ABF-01D7161EB180Q28681156-B25BC1CE-6F76-4D01-8338-56370FDD2585Q28681442-1EE6A687-9574-4CAA-A68B-B961E127821FQ28728273-D4850AC5-4BAE-4FDA-8EC2-236477CC95D3Q28757251-AA6155BF-6433-4A24-86DD-95EC5B93B008Q30051266-13C6F33A-B61E-4E78-A08C-E028BF639EDBQ30378249-DA87E09B-993F-40D9-B27C-5694616F5848Q32065052-4ABCA6E6-769D-4AF3-BB7A-13C3E24D0A4EQ33195241-3757297C-4483-4608-BA98-D40E389F11C2Q33217668-D3857C98-808C-424D-9E40-5962016D0E0CQ33554148-12A9C960-7433-48E7-8DF3-5DC21BB64EC8Q33987387-B8BDD509-BF32-4B7B-A0D9-FFE649D373D7Q33994663-525EE05B-89BF-423F-A99D-F59FECC14FCFQ34363743-29DF6C02-0FE1-471B-9BF7-413614BA3F45Q34983697-76016102-06E8-43A8-8BB6-3843553F8BCCQ35019143-1E1AB397-DC36-48C4-90BE-FD703888A3C3Q35148444-E6C9A909-9825-4FAD-B3F0-A448E3AB03A2Q35184011-24AC84AB-23BD-42E2-B19E-A355A1612466Q35687704-2BAAA366-D9C8-4B08-85E6-F2CB71544F20Q35898687-92A33D4C-C0A1-477B-95F4-584BB6294D2FQ35910979-AF7E5FD6-D36B-42EA-B8C9-CC28A0EFB3A5Q35911437-899D79D1-CC2D-4767-8A8B-79AADBB71CD0Q35967473-4ED1D21A-5CA5-4E70-BBF7-2E04D5EB61EEQ36038077-CAAA7C3A-0314-49F5-91EE-5702818D235EQ36056300-F99AC4BD-1902-4272-8230-7EED6DBA4D3BQ36236216-702CA84B-1978-4C81-A05E-B7AD18EB5B65Q36492163-F1492A62-15B2-4C8B-A59E-7EE96CABF1EAQ37041757-ADB3D8A6-D9FE-409E-9BBE-052E1268ACC6Q37059958-6A9F7594-23AE-4CAA-B5AB-91AC5A928169Q37240049-339EE80D-EC14-4BF9-A9A7-BD4AAD736F79Q37551423-E962447D-33F8-4A33-9422-F11AC50EAAD5Q38203101-5C97D9FD-172C-4AB4-B4FA-D98C1A5D50F1Q38348974-B24168CC-AC80-4C70-A502-388C55CD405FQ39899065-C67F5EA2-6ECF-4518-A2C7-F64AA172F5EF
P2860
Higher order structural elements in ribosomal RNAs: pseudo-knots and the use of noncanonical pairs.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on January 1990
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
Higher order structural elemen ...... the use of noncanonical pairs.
@en
Higher order structural elemen ...... the use of noncanonical pairs.
@nl
type
label
Higher order structural elemen ...... the use of noncanonical pairs.
@en
Higher order structural elemen ...... the use of noncanonical pairs.
@nl
prefLabel
Higher order structural elemen ...... the use of noncanonical pairs.
@en
Higher order structural elemen ...... the use of noncanonical pairs.
@nl
P2860
P356
P1476
Higher order structural elemen ...... the use of noncanonical pairs.
@en
P2093
P2860
P304
P356
10.1073/PNAS.87.2.663
P407
P577
1990-01-01T00:00:00Z