Preprocessing and downstream analysis of microarray DNA copy number profiles.
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Integrating genetics and epigenetics in breast cancer: biological insights, experimental, computational methods and therapeutic potentialConnecting Anxiety and Genomic Copy Number Variation: A Genome-Wide Analysis in CD-1 MiceMultiscale integration of -omic, imaging, and clinical data in biomedical informatics.Deciphering global signal features of high-throughput array data from cancers.A Systems Biology Interpretation of Array Comparative Genomic Hybridization (aCGH) Data through Phylogenetics.CGHpower: exploring sample size calculations for chromosomal copy number experiments.cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate.Extensive up-regulation of gene expression in cancer: the normalised use of microarray data.HPV type-related chromosomal profiles in high-grade cervical intraepithelial neoplasia.Comparative analysis of algorithms for integration of copy number and expression data.Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses.Hybridization and amplification rate correction for affymetrix SNP arrays.DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly.Focal chromosomal copy number aberrations identify CMTM8 and GPR177 as new candidate driver genes in osteosarcoma.Comparison of sequencing based CNV discovery methods using monozygotic twin quartets.Single-cell copy number variation detection.Characterization of cells from patient-derived fibrovascular membranes in proliferative diabetic retinopathy.Preserved genetic diversity in organoids cultured from biopsies of human colorectal cancer metastasesArray-based comparative genomic hybridization is more informative than conventional karyotyping and fluorescence in situ hybridization in the analysis of first-trimester spontaneous abortionDissecting the gray zone between follicular lymphoma and marginal zone lymphoma using morphological and genetic features.Genome wide copy number analyses of superficial esophageal squamous cell carcinoma with and without metastasisLessons from a decade of integrating cancer copy number alterations with gene expression profiles.Hide and seek: tell-tale signs of breast cancer lurking in the blood.CGH arrays compared for DNA isolated from formalin-fixed, paraffin-embedded material.Immortalization capacity of HPV types is inversely related to chromosomal instability.Gene-dosage dependent overexpression at the 13q amplicon identifies DIS3 as candidate oncogene in colorectal cancer progression.Integrating Heterogeneous Datasets for Cancer Module Identification.Focal aberrations indicate EYA2 and hsa-miR-375 as oncogene and tumor suppressor in cervical carcinogenesis.FocalCall: An R Package for the Annotation of Focal Copy Number Aberrations.NSD1- and NSD2-damaging mutations define a subset of laryngeal tumors with favorable prognosis.Wavelet-based clustering for mixed-effects functional models in high dimension.
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Preprocessing and downstream analysis of microarray DNA copy number profiles.
description
article científic
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article scientifique
@fr
articolo scientifico
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artigo científico
@pt
bilimsel makale
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scientific article published on 19 February 2010
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@en
Preprocessing and downstream analysis of microarray DNA copy number profiles.
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type
label
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@en
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@nl
prefLabel
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@en
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@nl
P2093
P2860
P356
P1476
Preprocessing and downstream analysis of microarray DNA copy number profiles.
@en
P2093
Franck Picard
Mark A van de Wiel
Wessel N van Wieringen
P2860
P356
10.1093/BIB/BBQ004
P50
P577
2010-02-19T00:00:00Z