Computational methods for prediction of protein-RNA interactions.
about
Computational Prediction of RNA-Binding Proteins and Binding SitesSpecificity and nonspecificity in RNA-protein interactionsComputational biology of RNA interactionsRNABindRPlus: a predictor that combines machine learning and sequence homology-based methods to improve the reliability of predicted RNA-binding residues in proteinsDiscovering RNA-protein interactome by using chemical context profiling of the RNA-protein interfaceAPRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteinsProtein-RNA interface residue prediction using machine learning: an assessment of the state of the artFastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface ResiduesStructural features that predict real-value fluctuations of globular proteinsRAID: a comprehensive resource for human RNA-associated (RNA-RNA/RNA-protein) interactionMolecular evolution of dihydrouridine synthases.Prediction of RNA binding residues: an extensive analysis based on structure and function to select the best predictor.Structure based approach for understanding organism specific recognition of protein-RNA complexesProtein-RNA complexes and efficient automatic docking: expanding RosettaDock possibilities.SNBRFinder: A Sequence-Based Hybrid Algorithm for Enhanced Prediction of Nucleic Acid-Binding Residues.RNA-binding residues prediction using structural features.A Large-Scale Assessment of Nucleic Acids Binding Site Prediction Programs.Combining structure probing data on RNA mutants with evolutionary information reveals RNA-binding interfaces.High-throughput prediction of RNA, DNA and protein binding regions mediated by intrinsic disorderIdentifying RNA-binding residues based on evolutionary conserved structural and energetic features.SPOT-Seq-RNA: predicting protein-RNA complex structure and RNA-binding function by fold recognition and binding affinity prediction.Prediction of RNA binding proteins comes of age from low resolution to high resolution.Discovery of protein-RNA networks.A comprehensive comparative review of sequence-based predictors of DNA- and RNA-binding residues.PRince: a web server for structural and physicochemical analysis of protein-RNA interface.Protein-RNA interactions: structural biology and computational modeling techniques.Review and comparative assessment of sequence-based predictors of protein-binding residues.Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins.A MOTIF-BASED METHOD FOR PREDICTING INTERFACIAL RESIDUES IN BOTH THE RNA AND PROTEIN COMPONENTS OF PROTEIN-RNA COMPLEXES.RBRIdent: An algorithm for improved identification of RNA-binding residues in proteins from primary sequences.Computational analysis of amino acids and their sidechain analogs in crowded solutions of RNA nucleobases with implications for the mRNA-protein complementarity hypothesis.Quantifying sequence and structural features of protein-RNA interactions.Exploring the molecular basis of RNA recognition by the dimeric RNA-binding protein via molecular simulation methods.DRNApred, fast sequence-based method that accurately predicts and discriminates DNA- and RNA-binding residues.Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score.Prediction of Disordered RNA, DNA, and Protein Binding Regions Using DisoRDPbind.Computational Prediction of RNA-Protein Interactions.Sequence-Based Prediction of RNA-Binding Residues in Proteins.Interactions of Protonated Guanidine and Guanidine Derivatives with Multiply Deprotonated RNA Probed by Electrospray Ionization and Collisionally Activated Dissociation.Comprehensive review and empirical analysis of hallmarks of DNA-, RNA- and protein-binding residues in protein chains.
P2860
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P2860
Computational methods for prediction of protein-RNA interactions.
description
article científic
@ca
article scientifique
@fr
articol științific
@ro
articolo scientifico
@it
artigo científico
@gl
artigo científico
@pt
artigo científico
@pt-br
artikel ilmiah
@id
artikull shkencor
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artículo científico
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name
Computational methods for prediction of protein-RNA interactions.
@en
Computational methods for prediction of protein-RNA interactions.
@nl
type
label
Computational methods for prediction of protein-RNA interactions.
@en
Computational methods for prediction of protein-RNA interactions.
@nl
prefLabel
Computational methods for prediction of protein-RNA interactions.
@en
Computational methods for prediction of protein-RNA interactions.
@nl
P50
P1476
Computational methods for prediction of protein-RNA interactions.
@en
P2093
Irina Tuszynska
Tomasz Puton
P304
P356
10.1016/J.JSB.2011.10.001
P577
2011-10-12T00:00:00Z