Protein-DNA binding: complexities and multi-protein codes.
about
Recent progress and open questions in Drosophila dosage compensationUsing protein-binding microarrays to study transcription factor specificity: homologs, isoforms and complexesA novel approach of dynamic cross correlation analysis on molecular dynamics simulations and its application to Ets1 dimer-DNA complexTranscriptome Changes during the Life Cycle of the Red Sponge, Mycale phyllophila (Porifera, Demospongiae, Poecilosclerida)Absence of a simple code: how transcription factors read the genomeA combination of computational and experimental approaches identifies DNA sequence constraints associated with target site binding specificity of the transcription factor CSL.Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning.HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.Increased subtlety of transcription factor binding increases complexity of genome regulation.Evolution of transcription factor function as a mechanism for changing metazoan developmental gene regulatory networksUV fluorescence of tryptophan residues effectively measures protein binding to nucleic acid fragments immobilized in gel elements of microarrays.The GATA transcription factor GtaC regulates early developmental gene expression dynamics in Dictyostelium.The orientation of transcription factor binding site motifs in gene promoter regions: does it matter?Function does not follow form in gene regulatory circuitsA Biophysical Approach to Predicting Protein-DNA Binding EnergeticsDeFCoM: analysis and modeling of transcription factor binding sites using a motif-centric genomic footprinter.Imputation for transcription factor binding predictions based on deep learningQuantification of Cooperativity in Heterodimer-DNA Binding Improves the Accuracy of Binding Specificity Models.To Be Specific or Not: The Critical Relationship Between Hox And TALE Proteins.The effects of cytosine methylation on general transcription factors.Quantitative modeling of gene expression using DNA shape features of binding sites.FAM122A, a new endogenous inhibitor of protein phosphatase 2AA pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation.In pursuit of design principles of regulatory sequences.Cis-regulatory elements and human evolutionProteins Recognizing DNA: Structural Uniqueness and Versatility of DNA-Binding Domains in Stem Cell Transcription Factors.Modeling protein-DNA binding via high-throughput in vitro technologies.Transcription factor-DNA binding: beyond binding site motifs.Whole-Genome and Epigenomic Landscapes of Etiologically Distinct Subtypes of Cholangiocarcinoma.DNA-binding protein prediction using plant specific support vector machines: validation and application of a new genome annotation tool.Diversification of transcription factor paralogs via noncanonical modularity in C2H2 zinc finger DNA binding.Identifying transcription factor complexes and their roles.Ultrasensitive colorimetric detection of NF-κB protein at picomolar levels using target-induced passivation of nanoparticles.Comprehensive review and empirical analysis of hallmarks of DNA-, RNA- and protein-binding residues in protein chains.Multiple DNA-binding modes for the ETS family transcription factor PU.1.Biochemical and structural characterization of a novel cooperative binding mode by Pit-1 with CATT repeats in the macrophage migration inhibitory factor promoter.The architecture of an empirical genotype-phenotype map.Cooperative recruitment of Yan via a high-affinity ETS supersite organizes repression to confer specificity and robustness to cardiac cell fate specification.Decoding the conformation-linked functional properties of nucleic acids by the use of computational tools.A thousand empirical adaptive landscapes and their navigability.
P2860
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P2860
Protein-DNA binding: complexities and multi-protein codes.
description
2013 nî lūn-bûn
@nan
2013年の論文
@ja
2013年学术文章
@wuu
2013年学术文章
@zh-cn
2013年学术文章
@zh-hans
2013年学术文章
@zh-my
2013年学术文章
@zh-sg
2013年學術文章
@yue
2013年學術文章
@zh
2013年學術文章
@zh-hant
name
Protein-DNA binding: complexities and multi-protein codes.
@en
type
label
Protein-DNA binding: complexities and multi-protein codes.
@en
prefLabel
Protein-DNA binding: complexities and multi-protein codes.
@en
P2860
P356
P1476
Protein-DNA binding: complexities and multi-protein codes.
@en
P2093
Raluca Gordân
Trevor Siggers
P2860
P304
P356
10.1093/NAR/GKT1112
P407
P577
2013-11-16T00:00:00Z
2014-02-01T00:00:00Z