Transcriptional enhancers: from properties to genome-wide predictions.
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Enhancer activation requires trans-recruitment of a mega transcription factor complexAdvanced In vivo Use of CRISPR/Cas9 and Anti-sense DNA Inhibition for Gene Manipulation in the BrainMotif co-regulation and co-operativity are common mechanisms in transcriptional, post-transcriptional and post-translational regulationGenetics of RA susceptibility, what comes next?Single-Base Pair Genome Editing in Human Cells by Using Site-Specific EndonucleasesEnabling functional genomics with genome engineeringGenomic Views of Transcriptional Enhancers: Essential Determinants of Cellular Identity and Activity-Dependent Responses in the CNSExploiting genomics and natural genetic variation to decode macrophage enhancersGenetic and genomic approaches to understanding macrophage identity and functionDNA-dependent formation of transcription factor pairs alters their binding specificityMechanisms of mutational robustness in transcriptional regulationEmerging applications of read profiles towards the functional annotation of the genomeEpigenetic alterations induced by genotoxic occupational and environmental human chemical carcinogens: A systematic literature reviewdbSUPER: a database of super-enhancers in mouse and human genomeMassively parallel cis-regulatory analysis in the mammalian central nervous systemARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice.Decreased cohesin in the brain leads to defective synapse development and anxiety-related behaviorEP-DNN: A Deep Neural Network-Based Global Enhancer Prediction AlgorithmOpening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions.Incorporating chromatin accessibility data into sequence-to-expression modelingIntegrating motif, DNA accessibility and gene expression data to build regulatory maps in an organismGenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data.ChromNet: Learning the human chromatin network from all ENCODE ChIP-seq data.Unmasking Upstream Gene Expression Regulators with miRNA-corrected mRNA DataComputational Approaches for Mining GRO-Seq Data to Identify and Characterize Active Enhancers.Integration of VDR genome wide binding and GWAS genetic variation data reveals co-occurrence of VDR and NF-κB binding that is linked to immune phenotypes.Structure of Nascent Chromatin Is Essential for Hematopoietic Lineage Specification.Functional assessment of CTCF sites at cytokine-sensing mammary enhancers using CRISPR/Cas9 gene editing in miceLandscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity.Systematic mapping of functional enhancer-promoter connections with CRISPR interference.Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genomePseudoexfoliation syndrome-associated genetic variants affect transcription factor binding and alternative splicing of LOXL1.Streamlined scanning for enhancer elements in Drosophila melanogaster.Histone deacetylase inhibitors potentiate photodynamic therapy in colon cancer cells marked by chromatin-mediated epigenetic regulation of CDKN1A.Contraction of intestinal effector T cells by retinoic acid-induced purinergic receptor P2X7Short DNA sequence patterns accurately identify broadly active human enhancersEnhancers as non-coding RNA transcription units: recent insights and future perspectives.Absence of a simple code: how transcription factors read the genomeHybrid mice reveal parent-of-origin and Cis- and trans-regulatory effects in the retinaGlobal transcriptome analysis and enhancer landscape of human primary T follicular helper and T effector lymphocytes.
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Transcriptional enhancers: from properties to genome-wide predictions.
description
article científic
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article scientifique
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articol științific
@ro
articolo scientifico
@it
artigo científico
@gl
artigo científico
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artigo científico
@pt-br
artikel ilmiah
@id
artikull shkencor
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artículo científico
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name
Transcriptional enhancers: from properties to genome-wide predictions.
@en
type
label
Transcriptional enhancers: from properties to genome-wide predictions.
@en
prefLabel
Transcriptional enhancers: from properties to genome-wide predictions.
@en
P2860
P356
P1476
Transcriptional enhancers: from properties to genome-wide predictions.
@en
P2093
Daria Shlyueva
P2860
P2888
P304
P356
10.1038/NRG3682
P577
2014-03-11T00:00:00Z
P6179
1000164192