Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain.
about
Reengineering orthogonally selective riboswitchesModulation of the stability of the Salmonella fourU-type RNA thermometerRiboswitch structure: an internal residue mimicking the purine ligandStructural principles of nucleoside selectivity in a 2′-deoxyguanosine riboswitchNMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights into RNA–Metal-Ion InteractionsStructural determinants for ligand capture by a class II preQ 1 riboswitchNMR Structures and Dynamics in a Prohead RNA Loop that Binds Metal IonsRiboswitches: structures and mechanismsStructure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopyDivalent ion competition reveals reorganization of an RNA ion atmosphere upon foldingIdiosyncratically tuned switching behavior of riboswitch aptamer domains revealed by comparative small-angle X-ray scattering analysis.Rapid kinetics of iron responsive element (IRE) RNA/iron regulatory protein 1 and IRE-RNA/eIF4F complexes respond differently to metal ions.Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding.Real-time multidimensional NMR follows RNA folding with second resolutionAmino acid recognition and gene regulation by riboswitches.The purine riboswitch as a model system for exploring RNA biology and chemistryDynamic energy landscapes of riboswitches help interpret conformational rearrangements and function.Clustering to identify RNA conformations constrained by secondary structureConstitutive regulatory activity of an evolutionarily excluded riboswitch variant.Riboswitches: discovery of drugs that target bacterial gene-regulatory RNAs.Rapidly optimizing an aptamer based BoNT sensor by feedback system control (FSC) scheme.Structure, dynamics, and mechanism of the lead-dependent ribozyme.Multiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy.Biophysical Approaches to Bacterial Gene Regulation by Riboswitches.Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values.Effects of Mg2+ on the free energy landscape for folding a purine riboswitch RNA.RNA dynamics: it is about time.The long and the short of riboswitches.Mg(2+)-induced conformational changes in the btuB riboswitch from E. coliIdentification of catalytic metal ion ligands in ribozymes.Reduced model captures Mg(2+)-RNA interaction free energy of riboswitchesTb3+-Cleavage Assays Reveal Specific Mg2+ Binding Sites Necessary to Pre-fold the btuB Riboswitch for AdoCbl Binding.Fast real-time NMR methods for characterizing short-lived molecular states.DNA Triplexes That Bind Several Cofactor Molecules.The importance of helix P1 stability for structural pre-organization and ligand binding affinity of the adenine riboswitch aptamer domain.Preparation of modified long-mer RNAs and analysis of FMN binding to the ypaA aptamer from B. subtilisLoop-loop interaction in an adenine-sensing riboswitch: a molecular dynamics studyAptamer-based spectrofluorometry for cellular prion protein using N,N'-bis[3,3'-(dimethylamino)propylamine]-3,4,9,10-perylenetetracarboxylic diimide.Conformational dynamics of the tetracycline-binding aptamer.Role of ligand binding in structural organization of add A-riboswitch aptamer: a molecular dynamics simulation.
P2860
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P2860
Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Metal-ion binding and metal-io ...... ing riboswitch aptamer domain.
@en
type
label
Metal-ion binding and metal-io ...... ing riboswitch aptamer domain.
@en
prefLabel
Metal-ion binding and metal-io ...... ing riboswitch aptamer domain.
@en
P2860
P356
P1476
Metal-ion binding and metal-io ...... ing riboswitch aptamer domain.
@en
P2093
Jens Wöhnert
Jonas Noeske
P2860
P304
P356
10.1093/NAR/GKM565
P407
P577
2007-08-07T00:00:00Z