Creation of a genome-wide metabolic pathway database for Populus trichocarpa using a new approach for reconstruction and curation of metabolic pathways for plants.
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A survey of metabolic databases emphasizing the MetaCyc familyPlant metabolic modeling: achieving new insight into metabolism and metabolic engineeringCorrelation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays.FragariaCyc: A Metabolic Pathway Database for Woodland Strawberry Fragaria vesca.Genetic basis and detection of unintended effects in genetically modified crop plantsThe MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databasesPatterns of metabolite changes identified from large-scale gene perturbations in Arabidopsis using a genome-scale metabolic networkGramene database in 2010: updates and extensionsWikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networksA genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stressThe Arabidopsis Information Resource (TAIR): improved gene annotation and new toolsIdentification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice, and soybeanMetNet Online: a novel integrated resource for plant systems biology.VitisCyc: a metabolic pathway knowledgebase for grapevine (Vitis vinifera).Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS.Pathway Analysis and Omics Data Visualization Using Pathway Genome Databases: FragariaCyc, a Case Study.High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resourceWeb-based metabolic network visualization with a zooming user interface.Weighted correlation network analysis (WGCNA) applied to the tomato fruit metabolome.Transcriptome sequencing of rhizome tissue of Sinopodophyllum hexandrum at two temperatures.Haplotype analysis of sucrose synthase gene family in three Saccharum speciesConversion of KEGG metabolic pathways to SBGN maps including automatic layout.Comprehensive transcriptomic study on horse gram (Macrotyloma uniflorum): De novo assembly, functional characterization and comparative analysis in relation to drought stressMeasuring semantic similarities by combining gene ontology annotations and gene co-function networks.Improved evidence-based genome-scale metabolic models for maize leaf, embryo, and endospermRNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicingPlantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics--database and tools updateIdentification of Novel Short Ragweed Pollen Allergens Using Combined Transcriptomic and Immunoproteomic ApproachesInter-functional analysis of high-throughput phenotype data by non-parametric clustering and its application to photosynthesis.Enhancing a Pathway-Genome Database (PGDB) to capture subcellular localization of metabolites and enzymes: the nucleotide-sugar biosynthetic pathways of Populus trichocarpaThe quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize.Transcripts of sulphur metabolic genes are co-ordinately regulated in developing seeds of common bean lacking phaseolin and major lectinsOmics-Based Comparative Transcriptional Profiling of Two Contrasting Rice Genotypes during Early Infestation by Small Brown PlanthopperSoyNet: a database of co-functional networks for soybean Glycine max.Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics.Gramene 2013: comparative plant genomics resources.Advances in omics and bioinformatics tools for systems analyses of plant functions.Flux-balance modeling of plant metabolism.Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks.Comprehensive classification and perspective for modelling photorespiratory metabolism.
P2860
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P2860
Creation of a genome-wide metabolic pathway database for Populus trichocarpa using a new approach for reconstruction and curation of metabolic pathways for plants.
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
2010年论文
@zh
2010年论文
@zh-cn
name
Creation of a genome-wide meta ...... metabolic pathways for plants.
@en
type
label
Creation of a genome-wide meta ...... metabolic pathways for plants.
@en
prefLabel
Creation of a genome-wide meta ...... metabolic pathways for plants.
@en
P2093
P2860
P356
P1433
P1476
Creation of a genome-wide meta ...... metabolic pathways for plants.
@en
P2093
A Karthikeyan
Anuradha Pujar
Cynthia Lee
Lukas A Mueller
Mario Latendresse
Peifen Zhang
Robert Muller
Seung Yon Rhee
P2860
P304
P356
10.1104/PP.110.157396
P407
P577
2010-06-03T00:00:00Z