Discovering common stem-loop motifs in unaligned RNA sequences.
about
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structureEvaluation of several lightweight stochastic context-free grammars for RNA secondary structure predictionRNA secondary structure prediction from sequence alignments using a network of k-nearest neighbor classifiers.A comprehensive comparison of comparative RNA structure prediction approachesUnifying evolutionary and thermodynamic information for RNA folding of multiple alignmentsEfficient pairwise RNA structure prediction and alignment using sequence alignment constraintsStructural analysis of aligned RNAsmRNA sequence features that contribute to translational regulation in ArabidopsisA method for aligning RNA secondary structures and its application to RNA motif detectionThe FOLDALIGN web server for pairwise structural RNA alignment and mutual motif searchStructure Prediction: New Insights into Decrypting Long Noncoding RNAsRNA motif discovery: a computational overviewSearching for IRESAnnotating RNA motifs in sequences and alignmentsCompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure predictionBayesFold: rational 2 degrees folds that combine thermodynamic, covariation, and chemical data for aligned RNA sequences.Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing dataAn accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data.Identification of consensus RNA secondary structures using suffix arraysCan Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules.Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix.An efficient genetic algorithm for structural RNA pairwise alignment and its application to non-coding RNA discovery in yeastFunctionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes.PicXAA-R: efficient structural alignment of multiple RNA sequences using a greedy approach.From structure prediction to genomic screens for novel non-coding RNAs.Prediction of consensus structural motifs in a family of coregulated RNA sequencesClassification and assessment tools for structural motif discovery algorithmsAdditivity in protein-DNA interactions: how good an approximation is it?GPRM: A genetic programming approach to finding common RNA secondary structure elements.3dRNAscore: a distance and torsion angle dependent evaluation function of 3D RNA structuresStatistical evaluation of improvement in RNA secondary structure prediction.Genome-wide map of RNA degradation kinetics patterns in dendritic cells after LPS stimulation facilitates identification of primary sequence and secondary structure motifs in mRNAs.mRNA stability control: a clandestine force in normal and malignant hematopoiesis.A max-margin model for efficient simultaneous alignment and folding of RNA sequences.A comprehensive comparison of general RNA-RNA interaction prediction methods.A comprehensive benchmark of RNA-RNA interaction prediction tools for all domains of life.A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications.Discovery of RNA structural elements using evolutionary computation.Engineering Structurally Interacting RNA (sxRNA).
P2860
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P2860
Discovering common stem-loop motifs in unaligned RNA sequences.
description
2001 nî lūn-bûn
@nan
2001年の論文
@ja
2001年論文
@yue
2001年論文
@zh-hant
2001年論文
@zh-hk
2001年論文
@zh-mo
2001年論文
@zh-tw
2001年论文
@wuu
2001年论文
@zh
2001年论文
@zh-cn
name
Discovering common stem-loop motifs in unaligned RNA sequences.
@en
Discovering common stem-loop motifs in unaligned RNA sequences.
@nl
type
label
Discovering common stem-loop motifs in unaligned RNA sequences.
@en
Discovering common stem-loop motifs in unaligned RNA sequences.
@nl
prefLabel
Discovering common stem-loop motifs in unaligned RNA sequences.
@en
Discovering common stem-loop motifs in unaligned RNA sequences.
@nl
P2860
P356
P1476
Discovering common stem-loop motifs in unaligned RNA sequences.
@en
P2093
G D Stormo
S L Stricklin
P2860
P304
P356
10.1093/NAR/29.10.2135
P407
P50
P577
2001-05-01T00:00:00Z