Exploring the repertoire of RNA secondary motifs using graph theory; implications for RNA design.
about
GraphClust: alignment-free structural clustering of local RNA secondary structuresAutomated 3D structure composition for large RNAsRAG: RNA-As-Graphs web resourceModular RNA architecture revealed by computational analysis of existing pseudoknots and ribosomal RNAsPredicting candidate genomic sequences that correspond to synthetic functional RNA motifs.RNA motif discovery: a computational overviewCollective properties of evolving molecular quasispeciesThe building blocks and motifs of RNA architecturePredicting helical topologies in RNA junctions as tree graphs.A quantitative analysis of secondary RNA structure using domination based parameters on trees.A novel representation of RNA secondary structure based on element-contact graphs.Computational approaches toward the design of pools for the in vitro selection of complex aptamers.COGNAC: a web server for searching and annotating hydrogen-bonded base interactions in RNA three-dimensional structures.RAG: an update to the RNA-As-Graphs resourceTopological structure of the space of phenotypes: the case of RNA neutral networksViral RNAs are unusually compactIn vitro RNA random pools are not structurally diverse: a computational analysis.Monitoring single-stranded DNA secondary structure formation by determining the topological state of DNA catenanes.Network Theory Tools for RNA Modeling.RiboFSM: frequent subgraph mining for the discovery of RNA structures and interactionsVisualizing large RNA molecules in solution.A computational proposal for designing structured RNA pools for in vitro selection of RNAsRNASTAR: an RNA STructural Alignment Repository that provides insight into the evolution of natural and artificial RNAs.Accurate Classification of RNA Structures Using Topological FingerprintsRAG-3D: a search tool for RNA 3D substructuresRNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.Automated and fast building of three-dimensional RNA structures.Lost in translation: translational interference from a recurrent mutation in exon 1 of MECP2.Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler.Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimationComputational approaches to RNA structure prediction, analysis, and design.StreAM-[Formula: see text]: algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphs.Large Deviations for Random Trees.Modular evolution and increase of functional complexity in replicating RNA moleculesR-CHIE: a web server and R package for visualizing RNA secondary structures.The structure of the genotype-phenotype map strongly constrains the evolution of non-coding RNA.Parametric analysis of RNA branching configurations.F-RAG: Generating Atomic Coordinates from RNA Graphs by Fragment Assembly.Opportunities and Challenges in RNA Structural Modeling and Design.Efficient RNA structure comparison algorithms.
P2860
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P2860
Exploring the repertoire of RNA secondary motifs using graph theory; implications for RNA design.
description
2003 nî lūn-bûn
@nan
2003年の論文
@ja
2003年学术文章
@wuu
2003年学术文章
@zh-cn
2003年学术文章
@zh-hans
2003年学术文章
@zh-my
2003年学术文章
@zh-sg
2003年學術文章
@yue
2003年學術文章
@zh
2003年學術文章
@zh-hant
name
Exploring the repertoire of RN ...... ; implications for RNA design.
@en
Exploring the repertoire of RN ...... ; implications for RNA design.
@nl
type
label
Exploring the repertoire of RN ...... ; implications for RNA design.
@en
Exploring the repertoire of RN ...... ; implications for RNA design.
@nl
prefLabel
Exploring the repertoire of RN ...... ; implications for RNA design.
@en
Exploring the repertoire of RN ...... ; implications for RNA design.
@nl
P2093
P2860
P356
P1476
Exploring the repertoire of RN ...... ; implications for RNA design.
@en
P2093
Hin Hark Gan
Samuela Pasquali
Tamar Schlick
P2860
P304
P356
10.1093/NAR/GKG365
P407
P577
2003-06-01T00:00:00Z