Gibbs Recursive Sampler: finding transcription factor binding sites. - Wikidata - awgldk - TriplyDB

Gibbs Recursive Sampler: finding transcription factor binding sites.

Gibbs Recursive Sampler: finding transcription factor binding sites.

http://www.wikidata.org/entity/Q39804560

about

Getting started in tiling microarray analysis PhyloScan: identification of transcription factor binding sites using cross-species evidence TC-motifs at the TATA-box expected position in plant genes: a novel class of motifs involved in the transcription regulation Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes Bacterial DNA uptake sequences can accumulate by molecular drive alone FOXC2 controls formation and maturation of lymphatic collecting vessels through cooperation with NFATc1 A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site prediction A survey of DNA motif finding algorithms TRACTOR_DB: a database of regulatory networks in gamma-proteobacterial genomes NestedMICA: sensitive inference of over-represented motifs in nucleic acid sequence PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences Ab initio identification of putative human transcription factor binding sites by comparative genomics Quantitative evaluation of protein-DNA interactions using an optimized knowledge-based potential Detecting DNA regulatory motifs by incorporating positional trends in information content Study of PcaV from Streptomyces coelicolor yields new insights into ligand-responsive MarR family transcription factors Global regulation by the yeast Spt10 protein is mediated through chromatin structure and the histone upstream activating sequence elements.Structure-templated predictions of novel protein interactions from sequence information Downregulation of GbpB, a component of the VicRK regulon, affects biofilm formation and cell surface characteristics of Streptococcus mutans Genome-wide analysis of DNA binding and transcriptional regulation by the mammalian Doublesex homolog DMRT1 in the juvenile testis Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA The Sac10b homolog in Methanococcus maripaludis binds DNA at specific sites Formation of the open complex by bacterial RNA polymerase--a quantitative model Characterization of the SOS regulon of Caulobacter crescentus.SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1.Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis.Dispom: a discriminative de-novo motif discovery tool based on the jstacs library.Use of a Probabilistic Motif Search to Identify Histidine Phosphotransfer Domain-Containing Proteins.Defining the DNA uptake specificity of naturally competent Haemophilus influenzae cells.Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor binding sites An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets.Inferring intra-motif dependencies of DNA binding sites from ChIP-seq data.A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--a case study using E2F1 A multispecies comparison of the metazoan 3'-processing downstream elements and the CstF-64 RNA recognition motif Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis Large-scale discovery of promoter motifs in Drosophila melanogaster Recognition of interferon-inducible sites, promoters, and enhancers.Discovering motifs in ranked lists of DNA sequences.A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana.rMotifGen: random motif generator for DNA and protein sequences.

P2860

Q21145659-290F64B3-DF28-4675-A5EF-68A64CC8A850 Q21203111-3725994A-F59F-4B4D-B7DF-1BCB85390961 Q21267233-40657036-1FDE-4ED5-BB90-561828F08F26 Q21284254-CE9CB67F-6F2C-4DB2-B8E8-31E7D15D1173 Q21284278-3B6CC8B8-6151-4569-8563-CC01CA484E5C Q24632090-4F60E251-84A6-4329-8A7B-57B91E2F991E Q24641842-D0ED592D-107D-4756-9D7C-133A1B37E06B Q24653758-8B2543FE-0501-4DBB-93BD-B4AD41F4E99D Q24684808-C0358442-DAD8-4219-9B0D-A200FC0F36A3 Q24794743-7D572C8B-DAC7-4089-9780-247F20C4E45D Q24797875-A3016014-2244-4B74-9C77-7E18D42DABB5 Q24799381-1272F85C-CCCD-4440-AC92-F2AE7D78424F Q24801141-D53BB71C-969E-4866-A2E0-614EB4D2FC94 Q24801775-5D6F58EF-071D-4577-A7C6-89D1B3E5A8B6 Q24805271-D8D841F2-48DD-4D94-B1D9-8577C46FAE93 Q27676313-AB0B2D6F-567C-4D04-B29E-5580F2F110A8 Q27934264-9ED78700-2383-4106-B7D5-5785593C5F8A Q28469306-DE9C1100-2927-4288-8520-2C54E290BE00 Q28485480-5EB2CBD1-894F-41B8-9F43-8F367E6E48C5 Q28509948-6862EA3F-4200-4DAE-BFC4-D47D6E6ED229 Q28588326-4BBFA9EA-A85D-4479-8ECF-02EEA44902B5 Q28755153-CED9345F-037D-4EAD-8BB5-301DB0CAF8DA Q28757627-4F0DFE10-0AB8-4C04-9D64-1EF61FD697F6 Q29346648-3507B833-1E8E-4CB2-9A76-16053228DD99 Q29346663-AED7D0D5-AB67-4632-A1DE-668D90D40E6B Q29346670-1C90BA84-4411-4AAD-B459-C0328C1286C8 Q30317875-4DEBE7D6-A756-4E0B-9372-922E2598CFC8 Q30383377-26E5A3EB-ED3E-45AC-A21C-1CFF0AC666F0 Q30424869-C04DC6BC-31FD-4604-B5E4-36F596F3DEEF Q30482385-D4870AEF-A8D7-4A02-A109-075AA3D63A65 Q31016283-80CE8C13-A846-4C3F-9203-0694FC8B52F5 Q31020447-FF7F56CA-98E6-4641-9424-733B94102BF5 Q31068338-FC87628B-0DF4-4930-8D27-5B0F3DA67401 Q33236766-5EEB40A6-511E-4EDF-8783-6065B721A92F Q33241168-89AAC8CA-DA99-486B-BF95-54F0757845A3 Q33269792-09956CC4-9BD2-4157-AC4B-7EF91F0B8C29 Q33274587-A4C1F75E-2237-4A93-880A-CDBCF5CBDEE5 Q33279806-B5DEEA76-46E2-43D9-9BCD-19A5DEFF48E2 Q33285303-5D799F99-B7F9-4F70-8445-40433979A6B0 Q33293468-F7E4CEB8-F092-4433-9132-57B4DD83B176

P2860

Gibbs Recursive Sampler: finding transcription factor binding sites.

http://www.wikidata.org/entity/Q39804560

description

2003 nî lūn-bûn

@nan

2003年の論文

@ja

2003年学术文章

@wuu

2003年学术文章

@zh-cn

2003年学术文章

@zh-hans

2003年学术文章

@zh-my

2003年学术文章

@zh-sg

2003年學術文章

@yue

2003年學術文章

@zh

2003年學術文章

@zh-hant

name

Gibbs Recursive Sampler: finding transcription factor binding sites.

@en

Gibbs Recursive Sampler: finding transcription factor binding sites.

@nl

type

label

Gibbs Recursive Sampler: finding transcription factor binding sites.

@en

Gibbs Recursive Sampler: finding transcription factor binding sites.

@nl

prefLabel

Gibbs Recursive Sampler: finding transcription factor binding sites.

@en

Gibbs Recursive Sampler: finding transcription factor binding sites.

@nl

P1433

Q39804560-9FED4BB3-928B-4DF1-A57C-14023DC2653F

P1476

Q39804560-590A252F-8BB0-4710-8871-0D1EDBBBCC08

P2093

Q39804560-C86A8B40-BED0-4213-985F-F61D7A77C2F6

Q39804560-F18450F9-6EDC-4C4D-831B-E732D5E137B8

Q39804560-F8302794-9F85-4143-8C36-24454BE61DC7

P2860

Q39804560-06751811-9A01-4488-B8D1-BD10DEFF7213

Q39804560-0BB6D910-1C6E-480B-B511-C06FCBADEA4F

Q39804560-0EEBBC05-EE9E-4702-ADF1-FBB6B0A77776

Q39804560-29D8FEEF-D878-4A52-A40B-B4D8A0C6C9BE

Q39804560-29F24254-C3C1-4785-9B12-C3725043E62A

Q39804560-3258831B-B90B-4A79-A126-6B2B9ADDFD27

Q39804560-5F26712D-DA88-4D61-98C3-DF99A37F6D68

Q39804560-6BF0E3AB-A3DC-461C-A5F5-EB02B183CC00

Q39804560-700886D0-9A40-40DA-8605-518135251AA0

Q39804560-76DE826D-5262-4CC8-934A-91022361B5E1

P304

Q39804560-86B5784D-9492-4DFB-A255-7E9C02605921

P31

Q39804560-D32BF37F-BD36-4C7A-B4A1-36CAF9E89D16

P356

Q39804560-A9E6F8A1-1526-48B2-80E8-CA7AA9395634

P407

Q39804560-E4742AA1-AD08-4B07-8F56-7DB9E245D400

P433

Q39804560-DE2DD781-C10B-4F2A-8082-17765F4AC047

P478

Q39804560-82ADE9D6-3C70-4F6A-9C12-A05CE207863F

P577

Q39804560-DF3A9801-A696-40B9-A3F3-E8D643907289

P5875

Q39804560-F50BE092-997C-491C-8901-2C955E9D485E

P698

Q39804560-B81E7596-83F5-4D7B-865E-1ACBE4CD7324

P932

Q39804560-E486001B-8521-45E7-AE35-C02B0941F62E

P356

P1433

Nucleic Acids Research

P1476

Gibbs Recursive Sampler: finding transcription factor binding sites.

@en

P2093

Charles E Lawrence

http://www.w3.org/2001/XMLSchema#string

Eric C Rouchka

http://www.w3.org/2001/XMLSchema#string

William Thompson

http://www.w3.org/2001/XMLSchema#string

P2860

Basic local alignment search tool

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome

Analysis of compositionally biased regions in sequence databases

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

Gibbs motif sampling: detection of bacterial outer membrane protein repeats.

Methods for calculating the probabilities of finding patterns in sequences.

Factors influencing the identification of transcription factor binding sites by cross-species comparison.

BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

P304

3580-3585

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/NAR/GKG608

http://www.w3.org/2001/XMLSchema#string

P407

P433

13

http://www.w3.org/2001/XMLSchema#string

P478

31

http://www.w3.org/2001/XMLSchema#string

P577

2003-07-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

10693469

http://www.w3.org/2001/XMLSchema#string

P698

12824370

http://www.w3.org/2001/XMLSchema#string

P932

169014

http://www.w3.org/2001/XMLSchema#string