Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus. - Wikidata - awgldk - TriplyDB

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus.

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus.

http://www.wikidata.org/entity/Q39996455

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Evolution of Gene Duplication in Plants Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS.The SHORT-ROOT-like gene PtSHR2B is involved in Populus phellogen activity.Identifying gene coexpression networks underlying the dynamic regulation of wood-forming tissues in Populus under diverse environmental conditions.The odds of duplicate gene persistence after polyploidization.Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression.Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture.Developmental and environmental regulation of Aquaporin gene expression across Populus species: divergence or redundancy?Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants.Elucidating the evolutionary history and expression patterns of nucleoside phosphorylase paralogs (vegetative storage proteins) in Populus and the plant kingdom.A synergism between adaptive effects and evolvability drives whole genome duplication to fixation.Origins and functional diversification of salinity-responsive Na(+) , K(+) ATPase α1 paralogs in salmonids.Large-Scale Gene Relocations following an Ancient Genome Triplication Associated with the Diversification of Core Eudicots Purifying selection acts on coding and non-coding sequences of paralogous genes in Arabidopsis thaliana Evolutionary and functional analysis of mulberry type III polyketide synthases.Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines.Both mechanism and age of duplications contribute to biased gene retention patterns in plants.Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.Sequence and gene expression evolution of paralogous genes in willows Locally duplicated ohnologs evolve faster than nonlocally duplicated ohnologs in Arabidopsis and rice.Spatial Colocalization of Human Ohnolog Pairs Acts to Maintain Dosage-Balance Pan- and core- network analysis of co-expression genes in a model plant.Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence.Three independent determinants of protein evolutionary rate.Population Level Purifying Selection and Gene Expression Shape Subgenome Evolution in Maize.The fate of duplicated genes in a polyploid plant genome.A deletion affecting an LRR-RLK gene co-segregates with the fruit flat shape trait in peach Genome-wide analysis of expansin superfamily in wild Arachis discloses a stress-responsive expansin-like B gene.Revisiting the sequencing of the first tree genome: Populus trichocarpa.Adaptive evolution and functional innovation of Populus-specific recently evolved microRNAs.Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta).Expression divergence of cellulose synthase (CesA) genes after a recent whole genome duplication event in Populus.Where do phosphosites come from and where do they go after gene duplication?Physiological and transcriptome analysis of heteromorphic leaves and hydrophilic roots in response to soil drying in desert Populus euphratica.Dominance and Sexual Dimorphism Pervade the Salix purpurea L. Transcriptome Identification of new protein-protein and protein-DNA interactions linked with wood formation in Populus trichocarpa.De novo RNA sequencing transcriptome of Rhododendron obtusum identified the early heat response genes involved in the transcriptional regulation of photosynthesis.The Populus ARBORKNOX1 homeodomain transcription factor regulates woody growth through binding to evolutionarily conserved target genes of diverse function.

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Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus.

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2011 nî lūn-bûn

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Contrasting patterns of evolut ...... duplication events in Populus.

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Contrasting patterns of evolut ...... duplication events in Populus.

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Contrasting patterns of evolut ...... duplication events in Populus.

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Contrasting patterns of evolut ...... duplication events in Populus.

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Eli Rodgers-Melnick

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Gancho T Slavov

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Palitha Dharmawardhana

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P2860

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Genome sequence of the palaeopolyploid soybean

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

The probability of preservation of a newly arisen gene duplicate

Preservation of duplicate genes by complementary, degenerative mutations

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

Transposed genes in Arabidopsis are often associated with flanking repeats

Rare germinal unequal crossing-over leading to recombinant gene formation and gene duplication in Arabidopsis thaliana

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