Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes

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Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion.Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies.

P2860

Q55078074-39760CA1-4E6E-483B-AFAE-87C31DD37965 Q55384392-95149C4B-DC7C-43EA-AFA6-65B05944025C

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Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes

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http://www.wikidata.org/entity/Q40360343

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2017 nî lūn-bûn

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2017年の論文

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2017年論文

@yue

2017年論文

@zh-hant

2017年論文

@zh-hk

2017年論文

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2017年論文

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2017年论文

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2017年论文

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2017年论文

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name

Comparative evaluation of rRNA ...... athogen culture transcriptomes

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type

Item

label

Comparative evaluation of rRNA ...... athogen culture transcriptomes

@en

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Comparative evaluation of rRNA ...... athogen culture transcriptomes

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P1476

Comparative evaluation of rRNA ...... athogen culture transcriptomes

@en

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Claudia Zampaloni

http://www.w3.org/2001/XMLSchema#string

Fernando Garcia-Alcalde

http://www.w3.org/2001/XMLSchema#string

Karin Sauer

http://www.w3.org/2001/XMLSchema#string

Olga E Petrova

http://www.w3.org/2001/XMLSchema#string

P2860

Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

Specific polyadenylation and purification of total messenger RNA from Escherichia coli

Fast gapped-read alignment with Bowtie 2

The Sequence Alignment/Map format and SAMtools

A novel signaling network essential for regulating Pseudomonas aeruginosa biofilm development

ChIP-Seq and RNA-Seq reveal an AmrZ-mediated mechanism for cyclic di-GMP synthesis and biofilm development by Pseudomonas aeruginosa

The novel Pseudomonas aeruginosa two-component regulator BfmR controls bacteriophage-mediated lysis and DNA release during biofilm development through PhdA

The MerR-like transcriptional regulator BrlR contributes to Pseudomonas aeruginosa biofilm tolerance

Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

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srep41114

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41114

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scholarly article

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10.1038/SREP41114

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English

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http://www.w3.org/2001/XMLSchema#string

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2017-01-24T00:00:00Z

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P698

28117413

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P921

RNA-Seq

Biofilm

P932

5259769

http://www.w3.org/2001/XMLSchema#string

Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes

about

P2860

P2860

Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes

description

name

type

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prefLabel

P1433

P1476

P2093

P2860

P2888

P304

P31

P356

P407

P478

P577

P698

P921

P932

P356

P1433

P1476

P2093

P2860

P2888

P304

P31

P356

P407

P478

P577

P698

P921

P932