Constructing multi-resolution Markov State Models (MSMs) to elucidate RNA hairpin folding mechanisms
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A role for both conformational selection and induced fit in ligand binding by the LAO proteinQuantitatively characterizing the ligand binding mechanisms of choline binding protein using Markov state model analysisQuantitative comparison of alternative methods for coarse-graining biological networksMarkov dynamic models for long-timescale protein motionNetwork models for molecular kinetics and their initial applications to human healthBuilding Markov state models with solvent dynamics.Kinetic network study of the diversity and temperature dependence of Trp-Cage folding pathways: combining transition path theory with stochastic simulations.A kinetic zipper model with intrachain interactions applied to nucleic acid hairpin folding kineticsHierarchical Conformational Analysis of Native Lysozyme Based on Sub-Millisecond Molecular Dynamics Simulations.Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement.Improved coarse-graining of Markov state models via explicit consideration of statistical uncertainty.Molecular simulations and Markov state modeling reveal the structural diversity and dynamics of a theophylline-binding RNA aptamer in its unbound stateComputational models of protein kinematics and dynamics: beyond simulation.Elucidation of the Dynamics of Transcription Elongation by RNA Polymerase II using Kinetic Network ModelsStreAM-[Formula: see text]: algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphs.Perspective: Markov models for long-timescale biomolecular dynamics.Theoretical restrictions on longest implicit time scales in Markov state models of biomolecular dynamics.Monovalent ions modulate the flux through multiple folding pathways of an RNA pseudoknot
P2860
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P2860
Constructing multi-resolution Markov State Models (MSMs) to elucidate RNA hairpin folding mechanisms
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
2010年论文
@zh
2010年论文
@zh-cn
name
Constructing multi-resolution ...... RNA hairpin folding mechanisms
@en
type
label
Constructing multi-resolution ...... RNA hairpin folding mechanisms
@en
prefLabel
Constructing multi-resolution ...... RNA hairpin folding mechanisms
@en
P2093
P2860
P1476
Constructing multi-resolution ...... RNA hairpin folding mechanisms
@en
P2093
Gregory R Bowman
Leonidas J Guibas
Vijay S Pande
Xuhui Huang
P2860
P304
P577
2010-01-01T00:00:00Z