Predicting protein function by genomic context: quantitative evaluation and qualitative inferences.
about
New connections in the prokaryotic toxin-antitoxin network: relationship with the eukaryotic nonsense-mediated RNA decay systemMutations in NDUFAF3 (C3ORF60), encoding an NDUFAF4 (C6ORF66)-interacting complex I assembly protein, cause fatal neonatal mitochondrial diseaseConstruction and analysis of protein-protein interaction networksThe origins and evolution of functional modules: lessons from protein complexesSTRING: a database of predicted functional associations between proteinsA survey of small RNA-encoding genes in Escherichia coliA novel method for accurate operon predictions in all sequenced prokaryotesApparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data setsThe society of genes: networks of functional links between genes from comparative genomicsVisualisation and graph-theoretic analysis of a large-scale protein structural interactomeComparative genomics of Archaea: how much have we learned in six years, and what's next?Domain fusion analysis by applying relational algebra to protein sequence and domain databasesEvolution of gene order conservation in prokaryotesA novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domainDetection of evolutionarily stable fragments of cellular pathways by hierarchical clustering of phyletic patternsTranscriptional regulation of protein complexes in yeastProlinks: a database of protein functional linkages derived from coevolutionGene family evolution: an in-depth theoretical and simulation analysis of non-linear birth-death-innovation modelsApplication of comparative genomics in the identification and analysis of novel families of membrane-associated receptors in bacteriaThe catalytic domains of thiamine triphosphatase and CyaB-like adenylyl cyclase define a novel superfamily of domains that bind organic phosphates.Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52The past, present and future of genome-wide re-annotation.Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new membersIdentifying cooperative transcriptional regulations using protein-protein interactionsGene annotation and network inference by phylogenetic profiling.ODB: a database of operons accumulating known operons across multiple genomes.The power of operon rearrangements for predicting functional associationsPopular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experimentsSequence-based prediction of type III secreted proteinsMetabolic pathway reconstruction strategies for central metabolism and natural product biosynthesisFunctional diversification of the RING finger and other binuclear treble clef domains in prokaryotes and the early evolution of the ubiquitin systemConserved 'hypothetical' proteins: new hints and new puzzlesGenetic co-occurrence network across sequenced microbesMycobacterium tuberculosis functional network analysis by global subcellular protein profilingPrediction of missing enzyme genes in a bacterial metabolic network. Reconstruction of the lysine-degradation pathway of Pseudomonas aeruginosaSimultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstructionStructure-based prediction of protein–protein interactions on a genome-wide scaleDeciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction PartnersSTRING v9.1: protein-protein interaction networks, with increased coverage and integrationDetection of novel members, structure-function analysis and evolutionary classification of the 2H phosphoesterase superfamily
P2860
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P2860
Predicting protein function by genomic context: quantitative evaluation and qualitative inferences.
description
2000 nî lūn-bûn
@nan
2000年の論文
@ja
2000年論文
@yue
2000年論文
@zh-hant
2000年論文
@zh-hk
2000年論文
@zh-mo
2000年論文
@zh-tw
2000年论文
@wuu
2000年论文
@zh
2000年论文
@zh-cn
name
Predicting protein function by ...... on and qualitative inferences.
@en
type
label
Predicting protein function by ...... on and qualitative inferences.
@en
prefLabel
Predicting protein function by ...... on and qualitative inferences.
@en
P2860
P356
P1433
P1476
Predicting protein function by ...... on and qualitative inferences.
@en
P2093
P2860
P304
P356
10.1101/GR.10.8.1204
P577
2000-08-01T00:00:00Z