Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
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Systems Medicine: The Application of Systems Biology Approaches for Modern Medical Research and Drug DevelopmentCERENA: ChEmical REaction Network Analyzer--A Toolbox for the Simulation and Analysis of Stochastic Chemical KineticsScalable Parameter Estimation for Genome-Scale Biochemical Reaction NetworksTailored parameter optimization methods for ordinary differential equation models with steady-state constraintsL1 regularization facilitates detection of cell type-specific parameters in dynamical systems.Data-driven mechanistic analysis method to reveal dynamically evolving regulatory networks.PeTTSy: a computational tool for perturbation analysis of complex systems biology models.Identification of Cell Type-Specific Differences in Erythropoietin Receptor Signaling in Primary Erythroid and Lung Cancer Cells.Driving the Model to Its Limit: Profile Likelihood Based Model ReductionViral RNA Degradation and Diffusion Act as a Bottleneck for the Influenza A Virus Infection Efficiency.Initial investigation of glucose metabolism in mouse brain using enriched 17 O-glucose and dynamic 17 O-MRS.Protein abundance of AKT and ERK pathway components governs cell type-specific regulation of proliferation.SBMLmod: a Python-based web application and web service for efficient data integration and model simulation.Performance of objective functions and optimisation procedures for parameter estimation in system biology models.Parameter estimation for dynamical systems with discrete events and logical operations.Systems modelling ageing: from single senescent cells to simple multi-cellular models.Fast integration-based prediction bands for ordinary differential equation models.Predicting ligand-dependent tumors from multi-dimensional signaling features.Conformational dynamics and role of the acidic pocket in ASIC pH-dependent gating.Model Based Targeting of IL-6-Induced Inflammatory Responses in Cultured Primary Hepatocytes to Improve Application of the JAK Inhibitor Ruxolitinib.Cell-specific responses to the cytokine TGFβ are determined by variability in protein levels.Modeling of Receptor Tyrosine Kinase Signaling: Computational and Experimental Protocols.Quantification of oxygen metabolic rates in Human brain with dynamic 17 O MRI: Profile likelihood analysis.PKA-RII subunit phosphorylation precedes activation by cAMP and regulates activity termination.Alterations of mTOR signaling impact metabolic stress resistance in colorectal carcinomas with BRAF and KRAS mutations.Optimization and profile calculation of ODE models using second order adjoint sensitivity analysis.Dual-controlled optogenetic system for the rapid down-regulation of protein levels in mammalian cells
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Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
description
2015 nî lūn-bûn
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2015年の論文
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2015年学术文章
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name
Data2Dynamics: a modeling envi ...... timation in dynamical systems.
@en
type
label
Data2Dynamics: a modeling envi ...... timation in dynamical systems.
@en
prefLabel
Data2Dynamics: a modeling envi ...... timation in dynamical systems.
@en
P2093
P2860
P50
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Data2Dynamics: a modeling envi ...... timation in dynamical systems.
@en
P2093
B Schöberl
M Schelker
R Engesser
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P304
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10.1093/BIOINFORMATICS/BTV405
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P50
P577
2015-07-03T00:00:00Z