Escherichia coli promoter sequences: analysis and prediction.
about
A novel method for prokaryotic promoter prediction based on DNA stabilityApollo: a sequence annotation editorConserved and variable functions of the sigmaE stress response in related genomes.Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEXPromoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress.SIGffRid: a tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics.Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes.An iterative strategy combining biophysical criteria and duration hidden Markov models for structural predictions of Chlamydia trachomatis sigma66 promoters.Identification of a novel anti-sigmaE factor in Neisseria meningitidis.Characterization of Drosophila OVO protein DNA binding specificity using random DNA oligomer selection suggests zinc finger degeneration.Promoter prediction in E. coli based on SIDD profiles and Artificial Neural Networks.Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE.Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profilingGenome-wide prediction and validation of sigma70 promoters in Lactobacillus plantarum WCFS1Fluorescence resonance energy transfer analysis of escherichia coli RNA polymerase and polymerase-DNA complexes.Promoters of Escherichia coli versus promoter islands: function and structure comparison.Computational approaches to identify promoters and cis-regulatory elements in plant genomes.Distinguishing between productive and abortive promoters using a random forest classifier in Mycoplasma pneumoniae.Anatomy of Escherichia coli sigma70 promoters.Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii.Stress-induced DNA duplex destabilization (SIDD) in the E. coli genome: SIDD sites are closely associated with promoters.A general procedure for locating and analyzing protein-binding sequence motifs in nucleic acids.Redefining Escherichia coli σ(70) promoter elements: -15 motif as a complement of the -10 motif.bTSSfinder: a novel tool for the prediction of promoters in cyanobacteria and Escherichia coli.Transcription in Mycoplasma pneumoniae.A reporter system coupled with high-throughput sequencing unveils key bacterial transcription and translation determinants.TSSPlant: a new tool for prediction of plant Pol II promoters.Gains and unexpected lessons from genome-scale promoter mapping.A pHMM-ANN based discriminative approach to promoter identification in prokaryote genomic contexts.Tuning the dynamic range of bacterial promoters regulated by ligand-inducible transcription factors.Multicellular and aggregative behaviour of Salmonella typhimurium strains is controlled by mutations in the agfD promoter.Contribution of bacterial promoter elements to transcription start site detection accuracy.Predicting antisense RNAs in the genomes of Escherichia coli and Salmonella typhimurium using promoter-search algorithm PlatProm.RAIL: A new tool for defining bacterial promoter regions.Electrostatic properties of promoter recognized by E. coli RNA polymerase Esigma70.
P2860
Q24791931-FE1ED477-49A7-4D75-B7C0-AD8F8C30D93FQ24803572-1F567575-5B53-4670-B0FE-0F5589277E98Q24811266-C30BD633-28E2-46BC-91ED-8683148D4E47Q31818949-88268281-46B2-4D40-85E0-CB80F644BF41Q33242489-F5EF95ED-0DA5-4690-B66D-172B29A2B6B2Q33317617-484466F8-8CF5-48D2-84FF-3292B6B16FE4Q33333632-852FE459-5367-42E9-89C8-FACECF06657EQ33498157-40011567-0ABB-4E85-A1D9-EDAB0CB37B38Q33595238-0E5A116F-4389-4BB3-962C-98F0EA5CC550Q33613858-EDE00A1C-BC4A-4B40-896F-2818B5E340A2Q33718562-6AC89941-E690-47EB-AD8F-506A03D605F5Q33733921-88C1E972-C071-408F-86FB-4B8211D03D48Q34001451-C5F19071-68DD-45D0-99B4-FD0E7CE114D8Q34388505-42E7B8CB-33FE-4A39-955E-910E872B1B33Q34428075-23AB11F5-2B3A-4F49-BFC9-A02768AD017CQ34622503-59514718-B54A-4055-AC01-75AB5C7E7DDCQ34743860-219A6FDA-F050-4159-AE21-B55A2796E259Q35176291-F361D9F9-E5B5-4DC1-B155-D66FC1B9D9C3Q35476240-8A673DB5-52F8-46CB-9E68-A5B228CF6822Q35658237-A74CA37F-87C3-4DB2-874F-EC8B2D77E00FQ37235338-CAE99B3B-A27C-48A0-851C-22FA846CE737Q37389150-971FA01F-AC16-4F52-909E-64761B03503AQ37483866-3A89338B-E025-4FCE-AC7B-ACA0E4DAE294Q38958313-AF92C124-B07B-4EAC-8B53-FF335F67B3DFQ39331095-EC8F86EC-D328-43AF-B222-C070EA0BF5F7Q39600994-F945AA6E-4B89-407E-8EF8-36672CE9A4B5Q41537272-A214E762-DF09-47C8-ADAB-675BDB42F6EFQ41869948-70BC15D7-F5DD-4FD7-9E71-F5081DDF6066Q41936173-8E90BA44-370A-48D1-8E9B-8D248A5BD21DQ42949354-36F8DA52-D7E0-448F-9D5D-FBA17458CE06Q47424197-5CE1343B-FCAB-413E-928F-EDEF073B793AQ47986866-9C01D83B-12EA-494E-B388-BC0DF3FA3D99Q48184769-84E72AE2-049B-4A96-A660-12562F4739BBQ50079191-73ED9E43-0104-4AB4-B799-63E80A723310Q52659562-18310924-8065-43B0-91D5-E177D4328ABCQ54461386-6239B8FD-DFB2-4C01-AD4C-60CB37FC9CC0
P2860
Escherichia coli promoter sequences: analysis and prediction.
description
1996 nî lūn-bûn
@nan
1996年の論文
@ja
1996年論文
@yue
1996年論文
@zh-hant
1996年論文
@zh-hk
1996年論文
@zh-mo
1996年論文
@zh-tw
1996年论文
@wuu
1996年论文
@zh
1996年论文
@zh-cn
name
Escherichia coli promoter sequences: analysis and prediction.
@en
type
label
Escherichia coli promoter sequences: analysis and prediction.
@en
prefLabel
Escherichia coli promoter sequences: analysis and prediction.
@en
P1476
Escherichia coli promoter sequences: analysis and prediction.
@en
P2093
P356
10.1016/S0076-6879(96)73004-5
P407
P577
1996-01-01T00:00:00Z