about
A structure-based benchmark for protein-protein binding affinityMolecular origins of binding affinity: seeking the Archimedean pointIn situ structural analysis of the human nuclear pore complexAre scoring functions in protein-protein docking ready to predict interactomes? Clues from a novel binding affinity benchmarkdMM-PBSA: A New HADDOCK Scoring Function for Protein-Peptide DockingPrediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experimentCommunity-wide assessment of protein-interface modeling suggests improvements to design methodology.Strengths and weaknesses of data-driven docking in critical assessment of prediction of interactions.Antimicrobial and efflux pump inhibitory activity of caffeoylquinic acids from Artemisia absinthium against gram-positive pathogenic bacteriaCommunity-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.Explicit treatment of water molecules in data-driven protein-protein docking: the solvated HADDOCKing approach.Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2.Solvated protein-DNA docking using HADDOCK.Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold.HADDOCK(2P2I): a biophysical model for predicting the binding affinity of protein-protein interaction inhibitors.The Combination of X-Ray Crystallography and Cryo-Electron Microscopy Provides Insight into the Overall Architecture of the Dodecameric Rvb1/Rvb2 Complex.New potential peptide therapeutics perturbing CK1δ/α-tubulin interaction.Blind prediction of interfacial water positions in CAPRISense and simplicity in HADDOCK scoring: Lessons from CASP-CAPRI round 1.On the binding affinity of macromolecular interactions: daring to ask why proteins interact.Spatiotemporal variation of mammalian protein complex stoichiometries.The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes.Capturing protein communities by structural proteomics in a thermophilic eukaryote.Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins.An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilumBuilding macromolecular assemblies by information-driven docking: introducing the HADDOCK multibody docking server.Haloadaptation: insights from comparative modeling studies of halophilic archaeal DHFRs.Proteins feel more than they see: fine-tuning of binding affinity by properties of the non-interacting surface.Defining the limits of homology modeling in information-driven protein docking.Clustering biomolecular complexes by residue contacts similarity.PRODIGY: a web server for predicting the binding affinity of protein-protein complexes.Non-interacting surface solvation and dynamics in protein-protein interactions.Solvated protein-protein docking using Kyte-Doolittle-based water preferencesNext challenges in protein-protein docking: from proteome to interactome and beyondProtein-Protein Docking with HADDOCKDefining distance restraints in HADDOCKIntegrative biology of native cell extracts: a new era for structural characterization of life processes2.7 Å cryo-EM structure of vitrified M. musculus H-chain apoferritin from a compact 200 keV cryo-microscopeConstructing artificial respiratory chain in polymer compartments: Insights into the interplay between bo 3 oxidase and the membrane
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hulumtues
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հետազոտող
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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Panagiotis L. Kastritis
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