Coarse-grained model for simulation of RNA three-dimensional structures.
about
Structure Prediction: New Insights into Decrypting Long Noncoding RNAsPrediction of solution properties and dynamics of RNAs by means of Brownian dynamics simulation of coarse-grained models: Ribosomal 5S RNA and phenylalanine transfer RNARNA and protein 3D structure modeling: similarities and differences.A Coarse-Grained Model of Unstructured Single-Stranded DNA Derived from Atomistic Simulation and Single-Molecule Experiment.A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactions.Putting structure into context: fitting of atomic models into electron microscopic and electron tomographic reconstructions.The power of coarse graining in biomolecular simulations.Vfold: a web server for RNA structure and folding thermodynamics prediction.The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systemsGay-Berne and electrostatic multipole based coarse-grain potential in implicit solvent.Holliday Junction Thermodynamics and Structure: Coarse-Grained Simulations and ExperimentsCoarse grained models reveal essential contributions of topological constraints to the conformational free energy of RNA bulges.Capturing RNA Folding Free Energy with Coarse-Grained Molecular Dynamics Simulations.Computational approaches to RNA structure prediction, analysis, and design.Perspective: Coarse-grained models for biomolecular systems.Large-scale study of long non-coding RNA functions based on structure and expression features.Physics-based RNA structure prediction.Progress and Current Challenges in Modeling Large RNAs.A coarse-grained model for assisting the investigation of structure and dynamics of large nucleic acids by ion mobility spectrometry-mass spectrometry.Coarse-grained prediction of RNA loop structures.Physics-based de novo prediction of RNA 3D structures.Many-body effect in ion binding to RNA.RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.F-RAG: Generating Atomic Coordinates from RNA Graphs by Fragment Assembly.Two-bead polarizable water models combined with a two-bead multipole force field (TMFF) for coarse-grained simulation of proteins.A nucleobase-centered coarse-grained representation for structure prediction of RNA motifs.A coarse-grained model with implicit salt for RNAs: predicting 3D structure, stability and salt effect.
P2860
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P2860
Coarse-grained model for simulation of RNA three-dimensional structures.
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
2010年论文
@zh
2010年论文
@zh-cn
name
Coarse-grained model for simulation of RNA three-dimensional structures.
@en
type
label
Coarse-grained model for simulation of RNA three-dimensional structures.
@en
prefLabel
Coarse-grained model for simulation of RNA three-dimensional structures.
@en
P2093
P2860
P356
P1476
Coarse-grained model for simulation of RNA three-dimensional structures
@en
P2093
David Paul Gardner
Pengyu Ren
P2860
P304
13497-13506
P356
10.1021/JP104926T
P407
P50
P577
2010-10-01T00:00:00Z