P185
Cooperation between referees and authors increases peer review accuracyOpinion: Reproducible research can still be wrong: adopting a prevention approachCapturing heterogeneity in gene expression studies by surrogate variable analysisPractical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysisPersonalized medicine: Keep a way open for tailored treatmentsSignificance analysis of time course microarray experiments.Tackling the widespread and critical impact of batch effects in high-throughput dataA decision-theory approach to interpretable set analysis for high-dimensional dataDifferential expression analysis of RNA-seq data at single-base resolutionRail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce.BatchQC: interactive software for evaluating sample and batch effects in genomic data.Asymptotic conditional singular value decomposition for high-dimensional genomic data.qSVA framework for RNA quality correction in differential expression analysisDissecting inflammatory complications in critically injured patients by within-patient gene expression changes: a longitudinal clinical genomics study.ReCount: a multi-experiment resource of analysis-ready RNA-seq gene count datasets.Cloud-scale RNA-sequencing differential expression analysis with MyrnaA statistical approach to selecting and confirming validation targets in -omics experimentsA randomized trial in a massive online open course shows people don't know what a statistically significant relationship looks like, but they can learn.Gene expression anti-profiles as a basis for accurate universal cancer signatures.A simple and reproducible breast cancer prognostic test.Developmental regulation of human cortex transcription and its clinical relevance at single base resolution.Gene set bagging for estimating the probability a statistically significant result will replicate.Systems-level dynamic analyses of fate change in murine embryonic stem cellsSignificance analysis and statistical dissection of variably methylated regions.Test set bias affects reproducibility of gene signatures.Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.The sva package for removing batch effects and other unwanted variation in high-throughput experimentsHuman splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive.Evolution of cellular morpho-phenotypes in cancer metastasis.Temporal dynamics and genetic control of transcription in the human prefrontal cortexBallgown bridges the gap between transcriptome assembly and expression analysis.Sequestration: inadvertently killing biomedical research to score political pointsA general framework for multiple testing dependence.Flexible expressed region analysis for RNA-seq with derfinder.Preserving biological heterogeneity with a permuted surrogate variable analysis for genomics batch correction.Rail-RNA: scalable analysis of RNA-seq splicing and coverage.Polyester: simulating RNA-seq datasets with differential transcript expression.Statistics: P values are just the tip of the iceberg.Statistics. What is the question?A computationally efficient modular optimal discovery procedure.
P50
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P50
description
biostatician and data scientist
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datawetenschapper
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հետազոտող
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeff Leek
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Jeffrey Leek
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Jeffrey Tullis Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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Jeffrey T. Leek
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P2002
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Jeffrey Leek
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