ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes. - Wikidata - awgldk - TriplyDB

ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes.

ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes.

http://www.wikidata.org/entity/Q41907446

about

The human gut resistome Antimicrobial usage and resistance in beef production Consolidating and Exploring Antibiotic Resistance Gene Data Resources Whole-genome assembly of Akkermansia muciniphila sequenced directly from human stool Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database Noncontiguous finished genome sequence and description of Enterococcus massiliensis sp. nov Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient Noncontiguous finished genome sequence and description of Murdochiella massiliensis strain SIT12 sp. nov Noncontiguous finished genome sequence and description of Bacillus testis strain SIT10 sp. nov Genomics of antibiotic-resistance prediction in Pseudomonas aeruginosa.Biological and Epidemiological Features of Antibiotic-Resistant Streptococcus pneumoniae in Pre- and Post-Conjugate Vaccine Eras: a United States Perspective.Microbial genomics and antimicrobial susceptibility testing.Search Engine for Antimicrobial Resistance: A Cloud Compatible Pipeline and Web Interface for Rapidly Detecting Antimicrobial Resistance Genes Directly from Sequence Data ISMapper: identifying transposase insertion sites in bacterial genomes from short read sequence data Massilibacterium senegalense gen. nov., sp. nov., a new bacterial genus isolated from the human gut.Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5.Bacillus niameyensis sp. nov., a new bacterial species isolated from human gut.ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database.Genome sequence and description of Actinomyces polynesiensis str. MS2 sp. nov. isolated from the human gut.Exploring divergent antibiotic resistance genes in ancient metagenomes and discovery of a novel beta-lactamase family.Prevalence and clonal relationship of ESBL-producing Salmonella strains from humans and poultry in northeastern Algeria.Whole genome sequencing in clinical and public health microbiology.SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology Whole-genome sequence of Chryseobacterium oranimense, a colistin-resistant bacterium isolated from a cystic fibrosis patient in France.SISPA-Seq for rapid whole genome surveys of bacterial isolates.Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events.Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health.MALDI-TOF MS as a Tool To Detect a Nosocomial Outbreak of Extended-Spectrum-β-Lactamase- and ArmA Methyltransferase-Producing Enterobacter cloacae Clinical Isolates in Algeria Molecular epidemiology and distribution of serotypes, genotypes, and antibiotic resistance genes of Streptococcus agalactiae clinical isolates from Guelma, Algeria and Marseille, France.Comparative genome analysis of the candidate functional starter culture strains Lactobacillus fermentum 222 and Lactobacillus plantarum 80 for controlled cocoa bean fermentation processes Identification of virulence factors and antibiotic resistance markers using bacterial genomics.Assessing the genetic diversity of Cu resistance in mine tailings through high-throughput recovery of full-length copA genes.Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems Target identification in Fusobacterium nucleatum by subtractive genomics approach and enrichment analysis of host-pathogen protein-protein interactions SSTAR, a Stand-Alone Easy-To-Use Antimicrobial Resistance Gene Predictor.Vancomycin gene selection in the microbiome of urban Rattus norvegicus from hospital environment.Functional characterization of the Mycobacterium abscessus genome coupled with condition specific transcriptomics reveals conserved molecular strategies for host adaptation and persistence The Genetic Analysis of an Acinetobacter johnsonii Clinical Strain Evidenced the Presence of Horizontal Genetic Transfer.

P2860

Q27027882-2491B991-9BA7-47A5-B2ED-A289A3128627 Q28075644-FA9D3562-CE85-4B80-8C11-80E2097CA3AA Q28079668-5AA32C5D-8F5E-4252-ACA9-6AEC7CFA3AB2 Q28260735-2E81EDB9-6F05-49EE-8722-A791B5D01216 Q28552964-159D619A-4606-4490-8960-FC019D846A94 Q28584458-49374806-B23F-4C21-82A5-21B2FABD4F8F Q28829765-57B5243D-FAB9-425D-B522-F5045D702E28 Q28830173-9C555489-4381-4C8C-95D0-2097BB7BA4E1 Q28830345-C6E7E0AC-C5BA-44DF-AAFB-F343C9AD70A5 Q28833751-05C71993-4D04-4832-94CB-77647C890578 Q30234118-926E065A-A1A5-4B6A-A156-763D462AAB33 Q30251593-1B066E57-FE95-4F6C-8535-919363CB4065 Q30397574-65410B7D-FB2C-43E0-901B-0A3B976207CF Q30981884-10C7783C-DADF-4DDA-8B47-49F882CEF7C2 Q30991359-6D74984B-21A4-4307-B807-E149D1B561A3 Q31051265-3FE2ADF0-B572-4D49-B9EA-C71708BDA069 Q31055301-923B0499-9A50-4D71-892E-285E430CC762 Q31076793-C276EEA6-4044-4178-9FA3-F48D3CBA3BA7 Q31092178-87E89238-9192-4A03-9327-3988640EE064 Q31097614-3FB7C8C0-EE49-4844-89FE-D77ED20A9077 Q31121373-62A71D23-6380-4504-AD50-E7A35F69EF00 Q33691769-9A886F26-5AD3-4DB4-B926-D863A3568828 Q34465192-986A06D7-D645-4B1F-BA8A-A8F8C13DE4B6 Q34544298-15AB2311-2495-45B4-9C61-1FC5E9B4F47F Q34968760-9F52227F-E439-411C-B288-8ADE9D8AD96F Q35076797-28A61BFF-384C-4594-AF6D-9DE178767D72 Q35583213-573AF08A-F1D9-4E36-8714-C22A9FA80105 Q35626884-7D1948B8-3EAF-4810-AD97-F02919C0FE02 Q35671444-BD007F8B-623D-4D4C-B974-1967C3CD10A1 Q35736641-58CE5CAD-1112-4D3E-AE9F-E21BA09E5710 Q35790825-FF1A9CCF-C548-44A6-B70B-14AC035D68C9 Q35804147-6241B77C-BAC4-4766-B3F6-A5B5625E177F Q35956049-4BE7B099-0014-45B5-97E9-E41F7CC7C9DC Q35969509-18821BBB-1225-41E8-B530-45BC27D6709E Q35994370-1E62206F-FA7F-4C68-BC31-BB10AFDB457B Q36017100-7A8BD756-CD6C-4FE4-AA1F-47259600A633 Q36052636-C4CC155A-76C0-4F36-B84A-08404723A8BB Q36076898-85C38CE3-903A-492B-A5EA-8404E632E355 Q36096266-26BA9EF5-392B-4DC6-B4BB-D7E6B34C97EE Q36109037-1790FB2C-680E-4E03-8A09-1CA17C551693

P2860

ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes.

http://www.wikidata.org/entity/Q41907446

description

2013 nî lūn-bûn

@nan

2013年の論文

@ja

2013年論文

@yue

2013年論文

@zh-hant

2013年論文

@zh-hk

2013年論文

@zh-mo

2013年論文

@zh-tw

2013年论文

@wuu

2013年论文

@zh

2013年论文

@zh-cn

name

ARG-ANNOT, a new bioinformatic ...... ce genes in bacterial genomes.

@en

type

label

ARG-ANNOT, a new bioinformatic ...... ce genes in bacterial genomes.

@en

prefLabel

ARG-ANNOT, a new bioinformatic ...... ce genes in bacterial genomes.

@en

P1433

Q41907446-D7D1D02F-1252-4A41-9ED6-9AB2FAAA9A78

P1476

Q41907446-6D2C032F-F024-4243-AB61-40765ED7196B

P2093

Q41907446-11E52192-A04C-4AA9-987D-4702016E4188

Q41907446-8793E1F3-A882-479A-B5D3-C9B7C8C4CCB4

Q41907446-96D5A0B5-4080-4DDD-83F5-AC48D671364E

Q41907446-9E26506E-0E28-4EA9-B593-127B85B6D9A0

Q41907446-B21E440A-5475-4B76-A7FB-6F6EBA88BF0D

P2860

Q41907446-0025A6CA-D997-4216-85A0-971FCBA0D4E9

Q41907446-10B680C3-F685-40C1-835E-1A3CB72C19EB

Q41907446-138228E4-73E3-4403-87FF-BD9E6756FF01

Q41907446-15633B1C-E002-4740-A5DB-497D97A5E371

Q41907446-17478AD0-8553-438D-A8EE-245D31C7BC7D

Q41907446-239F2086-23C8-4068-A393-4D424DEFA634

Q41907446-26F0C6B7-3D2D-44BF-8CEC-9A8D3BF73332

Q41907446-2F2D2823-3592-4257-8E98-47A77155990F

Q41907446-314BD3F2-0CC1-44BA-B9DC-E8981621E42B

Q41907446-3FC21FBA-4F8C-4215-9BC2-16EF568D1DB1

P304

Q41907446-BC8E43D7-6DDF-4474-8D26-9E095C2C6005

P31

Q41907446-AF0CBF98-9AE1-427C-917B-B25EA1C5429B

P356

Q41907446-9C601B27-8365-4705-BDF5-E4E881FA10AB

P407

Q41907446-E9DC23DB-0A4C-4B2B-A667-DFD59315E06B

P433

Q41907446-3EA076D0-A19D-4F9C-BA22-BA6CC2FCFC06

P478

Q41907446-78937493-C08D-443D-8B39-44838226E7E1

P50

Q41907446-45CB4CF7-E20A-4D95-A119-A6EA3DF6BF03

Q41907446-98619A1C-C107-4E1F-920B-B839B1F2D5D6

P577

Q41907446-34E1DE11-C384-44D9-9368-A3BA29EF79B7

P698

Q41907446-8CFA40F4-ACE4-4718-9587-BCD7A53FDFA0

P921

Q41907446-3D6339F3-F9FB-434C-8AA5-54B313A145A7

P932

Q41907446-BAC8F217-F68F-41FC-B5EA-F9C045301030

P356

P1433

Antimicrobial Agents and Chemotherapy

P1476

ARG-ANNOT, a new bioinformatic ...... ce genes in bacterial genomes.

@en

P2093

Babu Roshan Padmanabhan

http://www.w3.org/2001/XMLSchema#string

Luce Landraud

http://www.w3.org/2001/XMLSchema#string

Marie Kempf

http://www.w3.org/2001/XMLSchema#string

Rafael Lopez-Rojas

http://www.w3.org/2001/XMLSchema#string

Sushim Kumar Gupta

http://www.w3.org/2001/XMLSchema#string

P2860

Antibiotic resistance is prevalent in an isolated cave microbiome

The RAST Server: rapid annotations using subsystems technology

Basic local alignment search tool

Antibiotic resistance is ancient

Improved microbial gene identification with GLIMMER

Transforming clinical microbiology with bacterial genome sequencing.

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

Activation of PmrA inhibits LpxT-dependent phosphorylation of lipid A promoting resistance to antimicrobial peptides

Sequence analysis for detection of first-line drug resistance in Mycobacterium tuberculosis strains from a high-incidence setting

A pmrA constitutive mutant sensitizes Escherichia coli to deoxycholic acid

P304

212-220

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1128/AAC.01310-13

http://www.w3.org/2001/XMLSchema#string

P407

P433

1

http://www.w3.org/2001/XMLSchema#string

P478

58

http://www.w3.org/2001/XMLSchema#string

P50

Jean-Marc Rolain

Seydina M Diene

P577

2013-10-21T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P698

24145532

http://www.w3.org/2001/XMLSchema#string

P921

P932

3910750

http://www.w3.org/2001/XMLSchema#string