Metagenome fragment classification using N-mer frequency profiles.
about
Rapid identification of high-confidence taxonomic assignments for metagenomic dataAn introduction to the analysis of shotgun metagenomic dataSigma: strain-level inference of genomes from metagenomic analysis for biosurveillanceOrganizational heterogeneity of vertebrate genomesSignal processing for metagenomics: extracting information from the soup.PaPrBaG: A machine learning approach for the detection of novel pathogens from NGS data.Kraken: ultrafast metagenomic sequence classification using exact alignmentsClassifying short genomic fragments from novel lineages using composition and homology.NBC update: The addition of viral and fungal databases to the Naïve Bayes classification tool.Using the RDP classifier to predict taxonomic novelty and reduce the search space for finding novel organisms.A comparative evaluation of sequence classification programs.Rapid phylogenetic and functional classification of short genomic fragments with signature peptidesNBC: the Naive Bayes Classification tool webserver for taxonomic classification of metagenomic reads.Analysis of composition-based metagenomic classificationPhylogenetics and the human microbiomeResolving prokaryotic taxonomy without rRNA: longer oligonucleotide word lengths improve genome and metagenome taxonomic classificationDiscovering the unknown: improving detection of novel species and genera from short readsMixture models for analysis of the taxonomic composition of metagenomes.MetaID: a novel method for identification and quantification of metagenomic samples.MBBC: an efficient approach for metagenomic binning based on clustering.WGSQuikr: fast whole-genome shotgun metagenomic classification.ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition.Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities.Scalable metagenomics alignment research tool (SMART): a scalable, rapid, and complete search heuristic for the classification of metagenomic sequences from complex sequence populations.Differential Functional Constraints Cause Strain-Level Endemism in Polynucleobacter PopulationsCentrifuge: rapid and sensitive classification of metagenomic sequences.Shotgun metagenomics, from sampling to analysis.Computational prospecting the great viral unknown.Metagenome fragment classification based on multiple motif-occurrence profiles.Using pseudoalignment and base quality to accurately quantify microbial community composition.taxMaps: comprehensive and highly accurate taxonomic classification of short-read data in reasonable time.CoreProbe: A Novel Algorithm for Estimating Relative Abundance Based on Metagenomic Reads.
P2860
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P2860
Metagenome fragment classification using N-mer frequency profiles.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
Metagenome fragment classification using N-mer frequency profiles.
@en
type
label
Metagenome fragment classification using N-mer frequency profiles.
@en
prefLabel
Metagenome fragment classification using N-mer frequency profiles.
@en
P2093
P2860
P356
P1476
Metagenome fragment classification using N-mer frequency profiles.
@en
P2093
Bahrad Sokhansanj
Diamantino Caseiro
Elaine Garbarine
Gail Rosen
Robi Polikar
P2860
P304
P356
10.1155/2008/205969
P577
2008-11-16T00:00:00Z