Evolution of the mammalian transcription factor binding repertoire via transposable elements. - Wikidata - awgldk - TriplyDB

Evolution of the mammalian transcription factor binding repertoire via transposable elements.

Evolution of the mammalian transcription factor binding repertoire via transposable elements.

http://www.wikidata.org/entity/Q41955907

about

PPARG binding landscapes in macrophages suggest a genome-wide contribution of PU.1 to divergent PPARG binding in human and mouse De novo genesis of enhancers in vertebrates What fraction of the human genome is functional?Comparative studies of gene expression and the evolution of gene regulation Restricting retrotransposons: a review New Trends in Aryl Hydrocarbon Receptor Biology Transposable elements in the mammalian embryo: pioneers surviving through stealth and service Transposable Elements, Polydactyl Proteins, and the Genesis of Human-Specific Transcription Networks An expanding universe of the non-coding genome in cancer biology Genomic relationship between SINE retrotransposons, Pol III-Pol II transcription, and chromatin organization: the journey from junk to jewel Exploring Repetitive DNA Landscapes Using REPCLASS, a Tool That Automates the Classification of Transposable Elements in Eukaryotic Genomes Retrotransposons shape species-specific embryonic stem cell gene expression DNA methylation is dispensable for suppression of the agouti viable yellow controlling element in murine embryonic stem cells Insights into the Evolution of a Snake Venom Multi-Gene Family from the Genomic Organization of Echis ocellatus SVMP Genes Enrichment analysis of Alu elements with different spatial chromatin proximity in the human genome The persistent contributions of RNA to eukaryotic gen(om)e architecture and cellular function Regulation of Mouse Retroelement MuERV-L/MERVL Expression by REX1 and Epigenetic Control of Stem Cell Potency Hidden magicians of genome evolution Exaptation of transposable elements into novel cis-regulatory elements: is the evidence always strong?Transposable elements re-wire and fine-tune the transcriptome The role of Transposable Elements in shaping the combinatorial interaction of Transcription Factors 29 mammalian genomes reveal novel exaptations of mobile elements for likely regulatory functions in the human genome Rapid turnover of long noncoding RNAs and the evolution of gene expression Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages Mobile DNA and evolution in the 21st century Analysis of mammalian gene batteries reveals both stable ancestral cores and highly dynamic regulatory sequences The cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elements Coordinately Co-opted Multiple Transposable Elements Constitute an Enhancer for wnt5a Expression in the Mammalian Secondary Palate ChIP-seq: advantages and challenges of a maturing technology Remodeling of retrotransposon elements during epigenetic induction of adult visual cortical plasticity by HDAC inhibitors Transposable Element Insertions in Long Intergenic Non-Coding RNA Genes.Transposable Elements and DNA Methylation Create in Embryonic Stem Cells Human-Specific Regulatory Sequences Associated with Distal Enhancers and Noncoding RNAs Active enhancer positions can be accurately predicted from chromatin marks and collective sequence motif data.TE-Locate: A Tool to Locate and Group Transposable Element Occurrences Using Paired-End Next-Generation Sequencing Data.Transcription of the rat testis-specific Rtdpoz-T1 and -T2 retrogenes during embryo development: co-transcription and frequent exonisation of transposable element sequences.A Fast Cluster Motif Finding Algorithm for ChIP-Seq Data Sets.ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions Inherent signals in sequencing-based Chromatin-ImmunoPrecipitation control libraries.Organization and evolution of two SIDER retroposon subfamilies and their impact on the Leishmania genome.Isolation of putative FOXO1 genomic elements using an improved in vitro technique to isolate genomic regulatory sequences

P2860

Q21133922-8627890B-732B-42BB-A890-5EF0E1DFC1AE Q21145759-DCF61A0E-C299-438D-9513-FD9459B4C714 Q22065769-717D00E3-F8C5-436C-8CBF-35013D933B0D Q22122000-1803CF8A-E4CE-4041-A0F4-215D3BB8C286 Q26741496-2413B6F0-0AA3-4CCB-8395-08937BE85421 Q26744482-A78C0257-3766-47CC-AAEF-39CBCB182738 Q26751043-7606943B-036A-4B58-8070-66A33F71D286 Q26772090-15DB181A-CB12-4546-9CF3-326D8C4D4962 Q26865920-8DBE2B77-86FB-4BCB-9B05-D71F83C55FA6 Q27014985-6F8F69BD-54D3-4F64-9D8E-5B2BB694372E Q27490892-64C79BFB-1DA2-4C50-8516-1D1C82625490 Q28085502-1C9C8209-1ED1-4DBF-9E5E-5594EE6CC29F Q28542838-5E6E4DE4-2D3C-4910-A843-69DEB97A8F73 Q28595737-10D6239F-C7BB-43A3-8C3D-180CAA9EE532 Q28601408-2B4F83AF-433C-4BD9-AFF6-385279569A31 Q28652315-0CF063E4-8923-49A6-ADB0-809C7F928F3B Q28659478-6B2FB385-D030-4B46-8982-4BE10E102C5A Q28686989-6FC0558A-CC09-48BF-8D47-542531DE9C0B Q28704585-930EBF83-5295-44C9-BACB-F83128B30ED7 Q28709521-2F45D97F-C92E-4A51-AC6D-F1E8D6ECCE85 Q28715946-290C90E2-7015-4D9D-B13A-9444039F70A2 Q28728229-E627B6EC-B3D0-4BEC-9009-DCDD8FB80A23 Q28728747-CF30C1D5-F3C3-4905-A1AC-8011093640D8 Q28728805-A7F6B335-DC3E-4B87-9BE5-E94BBB744E32 Q28748605-7DD921F8-7ADF-4456-889F-B2EF4C2EDB52 Q28755362-64CE47B6-9805-42A9-9F8F-45FDF1EB056D Q28828237-1198E69F-4580-4E4E-83CB-5772071BC2FD Q28854375-AA29D59E-1F82-43E0-8BB4-4EACEBF0BFB8 Q29615336-50395FEF-99EC-4EFE-A848-9B32637E6205 Q30395908-6EE9E3C8-0532-409C-A1EC-C57F015EF2B5 Q30653831-64DDDDD3-F142-4C5A-9A4D-6B7CB9AE3E9A Q30656963-3687DB2B-449F-4F27-A9F8-97A089A801AB Q30763665-E05AD199-3A44-4699-B75C-DFC52DC28F8B Q30821572-49BD4687-31F7-427D-800D-0DE7AC3EBB80 Q30870995-1A90F30B-5D73-42C6-A62B-3ED9A825FF1F Q30984627-94FC2A7B-9499-46FF-A8DD-4617DDF3C567 Q33416643-5549F5BE-9870-418D-8D53-2CEF9430A643 Q33430252-EE6E7231-7D2A-42EA-A758-2BFB25379E0F Q33450990-F2865853-CC72-43D9-A98D-D0DDE2CBECBC Q33546201-F9346574-A0AA-42AA-89A7-ECDE044923FE

P2860

Evolution of the mammalian transcription factor binding repertoire via transposable elements.

http://www.wikidata.org/entity/Q41955907

description

2008 nî lūn-bûn

@nan

2008年の論文

@ja

2008年論文

@yue

2008年論文

@zh-hant

2008年論文

@zh-hk

2008年論文

@zh-mo

2008年論文

@zh-tw

2008年论文

@wuu

2008年论文

@zh

2008年论文

@zh-cn

name

Evolution of the mammalian tra ...... ire via transposable elements.

@en

type

label

Evolution of the mammalian tra ...... ire via transposable elements.

@en

prefLabel

Evolution of the mammalian tra ...... ire via transposable elements.

@en

P1433

Q41955907-E9692CC9-7636-430E-AE14-4D97ED0D71F8

P1476

Q41955907-96516762-2EE7-4093-81ED-4CC56665435D

P2093

Q41955907-053B7C23-747B-47E2-8CDD-1F93E4C7DC98

Q41955907-0D321604-4114-45A6-8393-8C89927C43E5

Q41955907-2917F9D5-AF1F-4685-8F33-81ABEA236C96

Q41955907-2F443D8A-4D57-4BA2-BBF9-E408FC857E43

Q41955907-3E146197-394D-434C-BF0D-EFC8D7F3B6EF

Q41955907-57DBFF87-E5C5-417C-9862-4879936930D3

Q41955907-7F12D3F2-4897-4304-B568-012F363D4A06

Q41955907-8C53BA23-29D9-4A77-BB8F-BDBA4E6DD5EC

Q41955907-DC8DE9C6-DE45-4131-A121-84C64A55262F

P2860

Q41955907-0A5EB7FE-0A89-469F-A34A-567390177EE6

Q41955907-0FD80139-05AD-41DB-8572-666397A467A8

Q41955907-0FDB005C-9B98-4E0F-A610-E8892C5DFAEE

Q41955907-11844D9C-5E91-4C1A-B7BB-F79E84CBE18B

Q41955907-12EA71D9-8807-434E-9009-2500162C913B

Q41955907-171D29D4-B286-4396-8DE0-BEBBD6F7BB19

Q41955907-1D489E01-9ACE-4A6F-9CD2-D39538725D18

Q41955907-1F234A8B-0770-4C40-99FA-6198C2657055

Q41955907-20F38629-BAAE-42C4-AEFC-B503F0A0F4EE

Q41955907-2DA22C31-4CDD-4C37-A785-A11494EC7533

P304

Q41955907-F98CFBAE-ACD2-47FC-9DB7-3A6F76EF076E

P31

Q41955907-8FD89768-4309-4519-A4E9-FCE2311864B8

P356

Q41955907-81321423-D83C-4196-A4AD-842E67F6B682

P433

Q41955907-C9262F4B-A03D-4980-9E26-BA46C53774F3

P478

Q41955907-30A33614-F496-4ED4-95E8-2C2665446228

P50

Q41955907-9E4A5C06-BD35-46FA-8BE0-DB343DA3CCF9

Q41955907-FF9F6DCE-213E-485B-8F37-1DB45321564A

P577

Q41955907-513B7E73-DC9B-49FE-B1C3-88D61B2D8F5F

P5875

Q41955907-2ECBA3FD-BACA-4031-B4EB-812B4F118024

P698

Q41955907-92D8863D-90BA-4BC7-9CC3-8360D36D4ED4

P932

Q41955907-B1B96578-9923-4EFB-A66C-2C9E9E62FED9

P356

P1433

Genome Research

P1476

Evolution of the mammalian tra ...... ire via transposable elements.

@en

P2093

Bernard Leong

http://www.w3.org/2001/XMLSchema#string

Chia-Lin Wei

http://www.w3.org/2001/XMLSchema#string

Edison T Liu

http://www.w3.org/2001/XMLSchema#string

Joon-Lin Chew

http://www.w3.org/2001/XMLSchema#string

Kandhadayar G Srinivasan

http://www.w3.org/2001/XMLSchema#string

Vinsensius B Vega

http://www.w3.org/2001/XMLSchema#string

Xi Chen

http://www.w3.org/2001/XMLSchema#string

Yen Ling Lee

http://www.w3.org/2001/XMLSchema#string

Yijun Ruan

http://www.w3.org/2001/XMLSchema#string

P2860

Initial sequencing and analysis of the human genome

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Ancient and recent positive selection transformed opioid cis-regulation in humans

Initial sequencing and comparative analysis of the mouse genome

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

Human-mouse alignments with BLASTZ

The human genome browser at UCSC

Global mapping of c-Myc binding sites and target gene networks in human B cells

Using genomic data to unravel the root of the placental mammal phylogeny

High-resolution profiling of histone methylations in the human genome

P304

1752-1762

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1101/GR.080663.108

http://www.w3.org/2001/XMLSchema#string

P433

11

http://www.w3.org/2001/XMLSchema#string

P478

18

http://www.w3.org/2001/XMLSchema#string

P50

Guillaume Bourque

P577

2008-08-05T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

23151534

http://www.w3.org/2001/XMLSchema#string

P698

18682548

http://www.w3.org/2001/XMLSchema#string

P932

2577865

http://www.w3.org/2001/XMLSchema#string