Nanoseconds molecular dynamics simulation of primary mechanical energy transfer steps in F1-ATP synthase.
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The unbinding of ATP from F1-ATPaseCHARMM: the biomolecular simulation programRotation of DNA around intact strand in human topoisomerase I implies distinct mechanisms for positive and negative supercoil relaxationMolecular dynamics and protein function.F1-ATPase conformational cycle from simultaneous single-molecule FRET and rotation measurementsMolecular dynamics simulations of the bacterial outer membrane protein FhuA: a comparative study of the ferrichrome-free and bound statesThe open state of human topoisomerase I as probed by molecular dynamics simulationWays and means of coping with uncertainties of the relationship of the genetic blue print to protein structure and function in the cellSimulating movement of tRNA into the ribosome during decoding.Switch interactions control energy frustration and multiple flagellar filament structures.Folding-based molecular simulations reveal mechanisms of the rotary motor F1-ATPase.Simple models for extracting mechanical work from the ATP hydrolysis cycle.How subunit coupling produces the gamma-subunit rotary motion in F1-ATPaseDomain compliance and elastic power transmission in rotary F(O)F(1)-ATPaseConverting conformational changes to electrostatic energy in molecular motors: The energetics of ATP synthaseTorsional elasticity and energetics of F1-ATPase.Phosphate release coupled to rotary motion of F1-ATPase.An improved strategy for generating forces in steered molecular dynamics: the mechanical unfolding of titin, e2lip3 and ubiquitin.Molecular dynamics simulations of the rotary motor F(0) under external electric fields across the membraneCoarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.Chemomechanical Coupling in Hexameric Protein-Protein Interfaces Harnesses Energy within V-Type ATPases.Rapid hydrolysis of ATP by mitochondrial F1-ATPase correlates with the filling of the second of three catalytic sitesInvestigation of pathways for the low-pH conformational transition in influenza hemagglutinin.Analysis of functional motions in Brownian molecular machines with an efficient block normal mode approach: myosin-II and Ca2+ -ATPase.Insights into the molecular mechanism of rotation in the Fo sector of ATP synthase.The unfolding action of GroEL on a protein substrateATP hydrolysis in the betaTP and betaDP catalytic sites of F1-ATPase.Nucleotide-dependent conformational changes in HisP: molecular dynamics simulations of an ABC transporter nucleotide-binding domain.Role of Charged Residues in the Catalytic Sites of Escherichia coli ATP Synthase.The missing link between thermodynamics and structure in F1-ATPase.From continuum Fokker-Planck models to discrete kinetic modelsZooming in on ATP hydrolysis in F1.Domain motion of individual F1-ATPase β-subunits during unbiased molecular dynamics simulations.Mechanism of substrate translocation by a ring-shaped ATPase motor at millisecond resolutionHigh performance computing in biology: multimillion atom simulations of nanoscale systemsBrønsted slopes based on single-molecule imaging data help to unveil the chemically coupled rotation in F1-ATPase.A model for the cooperative free energy transduction and kinetics of ATP hydrolysis by F1-ATPase.Rate of hydrolysis in ATP synthase is fine-tuned by α-subunit motif controlling active site conformation.The FOF1 ATP synthase: from atomistic three-dimensional structure to the rotary-chemical function.Conformational dynamics of the F1-ATPase beta-subunit: a molecular dynamics study.
P2860
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P2860
Nanoseconds molecular dynamics simulation of primary mechanical energy transfer steps in F1-ATP synthase.
description
2002 nî lūn-bûn
@nan
2002年の論文
@ja
2002年論文
@yue
2002年論文
@zh-hant
2002年論文
@zh-hk
2002年論文
@zh-mo
2002年論文
@zh-tw
2002年论文
@wuu
2002年论文
@zh
2002年论文
@zh-cn
name
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@en
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@nl
type
label
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@en
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@nl
prefLabel
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@en
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@nl
P356
P1476
Nanoseconds molecular dynamics ...... sfer steps in F1-ATP synthase.
@en
P2093
Helmut Grubmüller
P304
P356
10.1038/NSB760
P577
2002-03-01T00:00:00Z