Quantitative evaluation of all hexamers as exonic splicing elements - Wikidata - awgldk - TriplyDB

Quantitative evaluation of all hexamers as exonic splicing elements

Quantitative evaluation of all hexamers as exonic splicing elements

http://www.wikidata.org/entity/Q42181233

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Recursive splicing in long vertebrate genes.Context-dependent control of alternative splicing by RNA-binding proteins Computational Identification of Tissue-Specific Splicing Regulatory Elements in Human Genes from RNA-Seq Data SDHA related tumorigenesis: a new case series and literature review for variant interpretation and pathogenicity.The evolution, impact and properties of exonic splice enhancers.Optimal antisense target reducing INS intron 1 retention is adjacent to a parallel G quadruplex.Clinical and molecular characterization of cystinuria in a French cohort: relevance of assessing large-scale rearrangements and splicing variants.Saturation editing of genomic regions by multiplex homology-directed repair CodingMotif: exact determination of overrepresented nucleotide motifs in coding sequences Genomic HEXploring allows landscaping of novel potential splicing regulatory elements.Genome-wide association study identifies phospholipase C zeta 1 (PLCz1) as a stallion fertility locus in Hanoverian warmblood horses Purifying selection on splice-related motifs, not expression level nor RNA folding, explains nearly all constraint on human lincRNAs.Pre-mRNA splicing is facilitated by an optimal RNA polymerase II elongation rate.Splicing of designer exons informs a biophysical model for exon definition Activation and repression functions of an SR splicing regulator depend on exonic versus intronic-binding position Dissecting the target specificity of RNase H recruiting oligonucleotides using massively parallel reporter analysis of short RNA motifs.CoSREM: a graph mining algorithm for the discovery of combinatorial splicing regulatory elements Why Selection Might Be Stronger When Populations Are Small: Intron Size and Density Predict within and between-Species Usage of Exonic Splice Associated cis-Motifs.Exonic Splicing Mutations Are More Prevalent than Currently Estimated and Can Be Predicted by Using In Silico Tools.The role of short RNA loops in recognition of a single-hairpin exon derived from a mammalian-wide interspersed repeat.Genomic analysis of RNA localization.De Novo Synonymous Mutations in Regulatory Elements Contribute to the Genetic Etiology of Autism and Schizophrenia Determinants of the Usage of Splice-Associated cis-Motifs Predict the Distribution of Human Pathogenic SNPs Prediction of clustered RNA-binding protein motif sites in the mammalian genome.Genetic variations and alternative splicing: the Glioma associated oncogene 1, GLI1.From single splicing events to thousands: the ambiguous step forward in splicing research.Pick one, but be quick: 5' splice sites and the problems of too many choices.Regulation of gene expression through production of unstable mRNA isoforms.Mutations of Pre-mRNA Splicing Regulatory Elements: Are Predictions Moving Forward to Clinical Diagnostics?The power of multiplexed functional analysis of genetic variants.Evolutionarily conserved exon definition interactions with U11 snRNP mediate alternative splicing regulation on U11-48K and U11/U12-65K genes.Pathogenic variants that alter protein code often disrupt splicing.Cotranscriptional histone H2B monoubiquitylation is tightly coupled with RNA polymerase II elongation rate.Succession of splicing regulatory elements determines cryptic 5΄ss functionality.High-Throughput Assays to Assess the Functional Impact of Genetic Variants: A Road Towards Genomic-Driven Medicine.Intronic splicing enhancers, cognate splicing factors and context-dependent regulation rules DNA-methylation effect on cotranscriptional splicing is dependent on GC architecture of the exon-intron structure.Extensive functional analyses of RHD splice site variants: Insights into the potential role of splicing in the physiology of Rh.Knockdown and replacement therapy mediated by artificial mirtrons in spinocerebellar ataxia 7.The complete local genotype-phenotype landscape for the alternative splicing of a human exon.

P2860

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P2860

Quantitative evaluation of all hexamers as exonic splicing elements

http://www.wikidata.org/entity/Q42181233

description

2011 nî lūn-bûn

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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2011年论文

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2011年论文

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name

Quantitative evaluation of all hexamers as exonic splicing elements

@en

Quantitative evaluation of all hexamers as exonic splicing elements

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type

label

Quantitative evaluation of all hexamers as exonic splicing elements

@en

Quantitative evaluation of all hexamers as exonic splicing elements

@nl

prefLabel

Quantitative evaluation of all hexamers as exonic splicing elements

@en

Quantitative evaluation of all hexamers as exonic splicing elements

@nl

P1433

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Genome Research

P1476

Quantitative evaluation of all hexamers as exonic splicing elements

@en

P2093

Irina Morozova

http://www.w3.org/2001/XMLSchema#string

James J Russo

http://www.w3.org/2001/XMLSchema#string

Jingyue Ju

http://www.w3.org/2001/XMLSchema#string

Lawrence A Chasin

http://www.w3.org/2001/XMLSchema#string

Lin Yu

http://www.w3.org/2001/XMLSchema#string

Sergey M Kalachikov

http://www.w3.org/2001/XMLSchema#string

Shulian Shang

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P2860

Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins

Tight control of gene expression in mammalian cells by tetracycline-responsive promoters

The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities

Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins

Significance analysis of microarrays applied to the ionizing radiation response

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

Positive selection acting on splicing motifs reflects compensatory evolution

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts

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1360-1374

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scholarly article

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10.1101/GR.119628.110

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8

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21

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2011-06-09T00:00:00Z

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51206922

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21659425

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3149502

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