CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms. - Wikidata - awgldk - TriplyDB

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

http://www.wikidata.org/entity/Q42394881

about

Deregulation of the protocadherin gene FAT1 alters muscle shapes: implications for the pathogenesis of facioscapulohumeral dystrophy Parsimonious higher-order hidden Markov models for improved array-CGH analysis with applications to Arabidopsis thaliana.Copynumber: Efficient algorithms for single- and multi-track copy number segmentation.Evaluation of somatic copy number estimation tools for whole-exome sequencing data.Genovar: a detection and visualization tool for genomic variants.MixHMM: inferring copy number variation and allelic imbalance using SNP arrays and tumor samples mixed with stromal cells SegAnnDB: interactive Web-based genomic segmentation.An initial comparative map of copy number variations in the goat (Capra hircus) genome Making sense of cancer genomic data.SNP array analysis in hematologic malignancies: avoiding false discoveries waviCGH: a web application for the analysis and visualization of genomic copy number alterations.O-miner: an integrative platform for automated analysis and mining of -omics data.Discovery of structural alterations in solid tumor oligodendroglioma by single molecule analysis.Simple binary segmentation frameworks for identifying variation in DNA copy number.Cancer gene discovery in mouse and man.Changes in colorectal carcinoma genomes under anti-EGFR therapy identified by whole-genome plasma DNA sequencing.Detection of TRIM32 deletions in LGMD patients analyzed by a combined strategy of CGH array and massively parallel sequencing Genome-Wide DNA Copy Number Analysis of Acute Lymphoblastic Leukemia Identifies New Genetic Markers Associated with Clinical Outcome.Tumor-associated copy number changes in the circulation of patients with prostate cancer identified through whole-genome sequencing.High-throughput multiplex sequencing to discover copy number variants in Drosophila Evidence for feasibility of fetal trophoblastic cell-based noninvasive prenatal testing.Whole-genome plasma sequencing reveals focal amplifications as a driving force in metastatic prostate cancer.Pan-colonic field defects are detected by CGH in the colons of UC patients with dysplasia/cancer.Inferring expressed genes by whole-genome sequencing of plasma DNA.Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.Copy number variation in livestock: A mini review.

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CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

http://www.wikidata.org/entity/Q42394881

description

2008 nî lūn-bûn

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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2008年论文

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2008年论文

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name

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

@en

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

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type

label

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

@en

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

@nl

prefLabel

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

@en

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

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CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

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Peter J Park

http://www.w3.org/2001/XMLSchema#string

Vidhu Choudhary

http://www.w3.org/2001/XMLSchema#string

Weil Lai

http://www.w3.org/2001/XMLSchema#string

P2860

Global variation in copy number in the human genome

Circular binary segmentation for the analysis of array-based DNA copy number data

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma

A comparison study: applying segmentation to array CGH data for downstream analyses.

STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments.

CGH-Plotter: MATLAB toolbox for CGH-data analysis.

Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data.

Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.

SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis.

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1014-1015

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scholarly article

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10.1093/BIOINFORMATICS/BTN067

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7

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24

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18296463

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