Automatic validation of phosphopeptide identifications from tandem mass spectra. - Wikidata - awgldk - TriplyDB

Automatic validation of phosphopeptide identifications from tandem mass spectra.

Automatic validation of phosphopeptide identifications from tandem mass spectra.

http://www.wikidata.org/entity/Q42424450

about

MUMAL: multivariate analysis in shotgun proteomics using machine learning techniques Unambiguous phosphosite localization using electron-transfer/higher-energy collision dissociation (EThcD)Shotgun proteomics in neuroscience In-line separation by capillary electrophoresis prior to analysis by top-down mass spectrometry enables sensitive characterization of protein complexes Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles)Proteomics and the analysis of proteomic data: 2013 overview of current protein-profiling technologies.From raw data to biological discoveries: a computational analysis pipeline for mass spectrometry-based proteomics.PhosphoScore: an open-source phosphorylation site assignment tool for MSn data.Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics Integrated platform for manual and high-throughput statistical validation of tandem mass spectra.Strategies for quantitation of phosphoproteomic data.Polo-like kinase 4 kinase activity limits centrosome overduplication by autoregulating its own stability.Integrated data management and validation platform for phosphorylated tandem mass spectrometry data.Protein kinase C-η controls CTLA-4-mediated regulatory T cell function.Differential proteomic analysis of mammalian tissues using SILAM.A comparative phosphoproteomic analysis of a human tumor metastasis model using a label-free quantitative approach Quantitative in vivo analyses reveal calcium-dependent phosphorylation sites and identifies a novel component of the Toxoplasma invasion motor complex Phosphorylation site localization in peptides by MALDI MS/MS and the Mascot Delta Score.Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome Phospho-regulation of DDA3 function in mitosis Toward a complete in silico, multi-layered embryonic stem cell regulatory network.Calcium signaling through CaMKII regulates hepatic glucose production in fasting and obesity Protein analysis by shotgun/bottom-up proteomics Understanding protein phosphorylation on a systems level.PhosphoHunter: An Efficient Software Tool for Phosphopeptide Identification.Overlapping kinetochore targets of CK2 and Aurora B kinases in mitotic regulation.Single-step inline hydroxyapatite enrichment facilitates identification and quantitation of phosphopeptides from mass-limited proteomes with MudPIT PhosphoScan: a probability-based method for phosphorylation site prediction using MS2/MS3 pair information.Taking aim at shotgun phosphoproteomics An automated platform for analysis of phosphoproteomic datasets: application to kidney collecting duct phosphoproteins.Proteomics in the characterization of adipose dysfunction in obesity.Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events.Combined integrin phosphoproteomic analyses and small interfering RNA--based functional screening identify key regulators for cancer cell adhesion and migration.Motif-specific sampling of phosphoproteomes.Existing bioinformatics tools for the quantitation of post-translational modifications.Tandem mass spectrometry strategies for phosphoproteome analysis.Linking the proteins--elucidation of proteome-scale networks using mass spectrometry.Phosphoproteomic analysis: an emerging role in deciphering cellular signaling in human embryonic stem cells and their differentiated derivatives.Software eyes for protein post-translational modifications.

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P2860

Automatic validation of phosphopeptide identifications from tandem mass spectra.

http://www.wikidata.org/entity/Q42424450

description

2007 nî lūn-bûn

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name

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@en

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@nl

type

label

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@en

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@nl

prefLabel

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@en

Automatic validation of phosphopeptide identifications from tandem mass spectra.

@nl

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Analytical Chemistry

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Automatic validation of phosphopeptide identifications from tandem mass spectra.

@en

P2093

Bingwen Lu

http://www.w3.org/2001/XMLSchema#string

John Yates

http://www.w3.org/2001/XMLSchema#string

Sung Kyu Park

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Tao Xu

http://www.w3.org/2001/XMLSchema#string

P2860

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

Large-scale characterization of HeLa cell nuclear phosphoproteins

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

Tyrosine phosphorylation mapping of the epidermal growth factor receptor signaling pathway

Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry

Open mass spectrometry search algorithm

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

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