Tools for simulating evolution of aligned genomic regions with integrated parameter estimation. - Wikidata - awgldk - TriplyDB

Tools for simulating evolution of aligned genomic regions with integrated parameter estimation.

Tools for simulating evolution of aligned genomic regions with integrated parameter estimation.

http://www.wikidata.org/entity/Q42582308

about

Fast statistical alignment Simulation of genes and genomes forward in time From consensus structure prediction to RNA gene finding Simulation of molecular data under diverse evolutionary scenarios Automated reconstruction of ancient languages using probabilistic models of sound change Evolutionary modeling and prediction of non-coding RNAs in Drosophila Realistic artificial DNA sequences as negative controls for computational genomics.PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment Developing and applying heterogeneous phylogenetic models with XRate.Alignathon: a competitive assessment of whole-genome alignment methods.INDELible: a flexible simulator of biological sequence evolution Biological sequence simulation for testing complex evolutionary hypotheses: indel-Seq-Gen version 2.0.Cactus: Algorithms for genome multiple sequence alignment.Simulation of genome-wide evolution under heterogeneous substitution models and complex multispecies coalescent histories.Estimating empirical codon hidden Markov models.

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P2860

Tools for simulating evolution of aligned genomic regions with integrated parameter estimation.

http://www.wikidata.org/entity/Q42582308

description

2008 nî lūn-bûn

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2008年の論文

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2008年論文

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name

Tools for simulating evolution ...... tegrated parameter estimation.

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Tools for simulating evolution ...... tegrated parameter estimation.

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type

label

Tools for simulating evolution ...... tegrated parameter estimation.

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Tools for simulating evolution ...... tegrated parameter estimation.

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prefLabel

Tools for simulating evolution ...... tegrated parameter estimation.

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Tools for simulating evolution ...... tegrated parameter estimation.

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Tools for simulating evolution ...... tegrated parameter estimation.

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Avinash Varadarajan

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P2860

Identification and classification of conserved RNA secondary structures in the human genome

XRate: a fast prototyping, training and annotation tool for phylo-grammars

Evolution of genes and genomes on the Drosophila phylogeny

An RNA gene expressed during cortical development evolved rapidly in humans

MONKEY: identifying conserved transcription-factor binding sites in multiple alignments using a binding site-specific evolutionary model

Benchmarking tools for the alignment of functional noncoding DNA

FlyBase: integration and improvements to query tools

Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints

Pfold: RNA secondary structure prediction using stochastic context-free grammars

The accuracy of several multiple sequence alignment programs for proteins

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scholarly article

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10

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9

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Robert K. Bradley

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