Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models.
about
Cultivation and complete genome sequencing of Gloeobacter kilaueensis sp. nov., from a lava cave in Kīlauea Caldera, Hawai'iAn insect herbivore microbiome with high plant biomass-degrading capacityA primer on metagenomicsComplete Columbian mammoth mitogenome suggests interbreeding with woolly mammothsMetagenomics - a guide from sampling to data analysisUnlocking short read sequencing for metagenomicsComplex archaea that bridge the gap between prokaryotes and eukaryotesMetagenomic microbial community profiling using unique clade-specific marker genesIntegrative analysis of environmental sequences using MEGAN4Gene prediction with Glimmer for metagenomic sequences augmented by classification and clusteringRapid identification of high-confidence taxonomic assignments for metagenomic dataMetagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome AnalysisMetagenomics: Retrospect and Prospects in High Throughput AgeMetagenomic surveys of gut microbiotaFrom cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystemsMetagenomic analysis: the challenge of the data bonanzaAn introduction to the analysis of shotgun metagenomic dataEvaluation of short read metagenomic assemblyINDUS - a composition-based approach for rapid and accurate taxonomic classification of metagenomic sequencesHost-Microbiome Interaction and Cancer: Potential Application in Precision MedicineMicrobial bioinformatics for food safety and productionValidation of high throughput sequencing and microbial forensics applications.Variation in tropical reef symbiont metagenomes defined by secondary metabolismMetatranscriptomic analysis of diminutive Thiomargarita-like bacteria ("Candidatus Thiopilula" spp.) from abyssal cold seeps of the Barbados Accretionary PrismPhylogenetic analysis of a spontaneous cocoa bean fermentation metagenome reveals new insights into its bacterial and fungal community diversityPhymmBL expanded: confidence scores, custom databases, parallelization and morePerformance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihoodMetabolic network modeling of microbial communities.Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sampleEdge principal components and squash clustering: using the special structure of phylogenetic placement data for sample comparison.Mountain pine beetles colonizing historical and naive host trees are associated with a bacterial community highly enriched in genes contributing to terpene metabolism.Class prediction and feature selection with linear optimization for metagenomic count data.Phytoplankton-bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edgeMining RNA-seq data for infections and contaminations.MetaCluster-TA: taxonomic annotation for metagenomic data based on assembly-assisted binning.Consistency of metagenomic assignment programs in simulated and real data.Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data.Classification of metagenomics data at lower taxonomic level using a robust supervised classifier.Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.
P2860
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P2860
Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models.
description
2009 nî lūn-bûn
@nan
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
2009年论文
@zh
2009年论文
@zh-cn
name
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@en
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@nl
type
label
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@en
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@nl
prefLabel
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@en
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@nl
P2860
P356
P1433
P1476
Phymm and PhymmBL: metagenomic ...... th interpolated Markov models.
@en
P2093
Arthur Brady
P2860
P2888
P304
P356
10.1038/NMETH.1358
P577
2009-08-02T00:00:00Z
P5875
P6179
1008886215