about
Structural conservation of druggable hot spots in protein-protein interfacesSampling and scoring: a marriage made in heavenAnalysis of Binding Site Hot Spots on the Surface of Ras GTPaseEvidence of conformational selection driving the formation of ligand binding sites in protein-protein interfacesThe impact of side-chain packing on protein docking refinementPrediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experimentA benchmark testing ground for integrating homology modeling and protein docking.Minimal ensembles of side chain conformers for modeling protein-protein interactionsDetection of Peptide-Binding Sites on Protein Surfaces Using the Peptimap Server.Fragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques.Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase.Discrimination of near-native structures in protein-protein docking by testing the stability of local minima.Insights into the architecture of the eIF2Bα/β/δ regulatory subcomplexBlocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replication.Where does amantadine bind to the influenza virus M2 proton channel?Robust identification of binding hot spots using continuum electrostatics: application to hen egg-white lysozyme.Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.FTMAP: extended protein mapping with user-selected probe molecules.Docking server for the identification of heparin binding sites on proteins.Efficient Maintenance and Update of Nonbonded Lists in Macromolecular Simulations.A first-generation multi-functional cytokine for simultaneous optical tracking and tumor therapyOptimal clustering for detecting near-native conformations in protein docking.Ligand binding and activation of PPARγ by Firemaster® 550: effects on adipogenesis and osteogenesis in vitroReversing chemoresistance by small molecule inhibition of the translation initiation complex eIF4FAchieving reliability and high accuracy in automated protein docking: ClusPro, PIPER, SDU, and stability analysis in CAPRI rounds 13-19Stimulators of translation identified during a small molecule screening campaignHow proteins bind macrocycles.Evolutionary origins of the estrogen signaling system: insights from amphioxusFTSite: high accuracy detection of ligand binding sites on unbound protein structuresHot spot analysis for driving the development of hits into leads in fragment-based drug discovery.New Frontiers in DruggabilityEnergy Minimization on Manifolds for Docking Flexible Molecules.Blind prediction of interfacial water positions in CAPRIComputational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehydeLessons from Hot Spot Analysis for Fragment-Based Drug Discovery.Application of asymmetric statistical potentials to antibody-protein dockingAnalysis of protein binding sites by computational solvent mapping.The FTMap family of web servers for determining and characterizing ligand-binding hot spots of proteins.Focused grid-based resampling for protein docking and mapping.Relationship between hot spot residues and ligand binding hot spots in protein-protein interfaces.
P50
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P50
description
hulumtues
@sq
onderzoeker
@nl
researcher
@en
հետազոտող
@hy
name
Dima Kozakov
@ast
Dima Kozakov
@en
Dima Kozakov
@es
Dima Kozakov
@nl
Dima Kozakov
@sl
type
label
Dima Kozakov
@ast
Dima Kozakov
@en
Dima Kozakov
@es
Dima Kozakov
@nl
Dima Kozakov
@sl
prefLabel
Dima Kozakov
@ast
Dima Kozakov
@en
Dima Kozakov
@es
Dima Kozakov
@nl
Dima Kozakov
@sl
P106
P1153
8695707200
P21
P2456
P31
P496
0000-0003-0464-4500