Ultra-deep Illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata).
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Selection on Coding and Regulatory Variation Maintains Individuality in Major Urinary Protein Scent Marks in Wild Mice.Molecular characterization of MHC class IIB genes of sympatric Neotropical cichlids.AMPLISAS: a web server for multilocus genotyping using next-generation amplicon sequencing data.Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping-by-sequencing data from natural populations.Characterization of MHC class I in a long distance migratory wader, the Icelandic black-tailed godwitNo evidence for the effect of MHC on male mating success in the brown bearMHC class II variation in a rare and ecological specialist mouse lemur reveals lower allelic richness and contrasting selection patterns compared to a generalist and widespread sympatric congenerEffect of the enzyme and PCR conditions on the quality of high-throughput DNA sequencing resultsContrasting evolutionary histories of MHC class I and class II loci in grouse--effects of selection and gene conversionAdaptive major histocompatibility complex (MHC) and neutral genetic variation in two native Baltic Sea fishes (perch Perca fluviatilis and zander Sander lucioperca) with comparisons to an introduced and disease susceptible population in Australia (PNext-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications.PCR Strategies for Complete Allele Calling in Multigene Families Using High-Throughput Sequencing Approaches.Lack of Spatial Immunogenetic Structure among Wolverine (Gulo gulo) Populations Suggestive of Broad Scale Balancing Selection.Large-scale genotyping of highly polymorphic loci by next-generation sequencing: how to overcome the challenges to reliably genotype individuals?Microsatellite and major histocompatibility complex variation in an endangered rattlesnake, the Eastern Massasauga (Sistrurus catenatus).Spatial patterns of immunogenetic and neutral variation underscore the conservation value of small, isolated American badger populationsCritical review of NGS analyses for de novo genotyping multigene families.Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family: MHC class I in a passerine bird.A quantitative and qualitative comparison of illumina MiSeq and 454 amplicon sequencing for genotyping the highly polymorphic major histocompatibility complex (MHC) in a non-model species.Extreme MHC class I diversity in the sedge warbler (Acrocephalus schoenobaenus); selection patterns and allelic divergence suggest that different genes have different functions.The effects of historical fragmentation on major histocompatibility complex class II β and microsatellite variation in the Aegean island reptile, Podarcis erhardii.Sorting duplicated loci disentangles complexities of polyploid genomes masked by genotyping by sequencing.Small-scale intraspecific patterns of adaptive immunogenetic polymorphisms and neutral variation in Lake Superior lake trout.454 screening of individual MHC variation in an endemic island passerine.Gene duplication and divergence produce divergent MHC genotypes without disassortative matingCharacterization of MHC class II B polymorphism in multiple populations of wild gorillas using non-invasive samples and next-generation sequencing.MHC, parasites and antler development in red deer: no support for the Hamilton & Zuk hypothesis.Major histocompatibility complex similarity and sexual selection: different does not always mean attractive.Drift, selection, or migration? Processes affecting genetic differentiation and variation along a latitudinal gradient in an amphibian.Evolutionary genetics of immunological supertypes reveals two faces of the Red Queen.Balancing selection and genetic drift create unusual patterns of MHCIIβ variation in Galápagos mockingbirds.Specific alleles at immune genes, rather than genome-wide heterozygosity, are related to immunity and survival in the critically endangered Attwater's prairie-chicken.Family-assisted inference of the genetic architecture of major histocompatibility complex variation.Reciprocal translocation of small numbers of inbred individuals rescues immunogenetic diversity.Contrasting patterns of selection and drift between two categories of immune genes in prairie-chickens.Selective pressures on MHC class II genes in the guppy (Poecilia reticulata) as inferred by hierarchical analysis of population structure.Lack of evidence for selection favouring MHC haplotypes that combine high functional diversity.Immunogenetic novelty confers a selective advantage in host-pathogen coevolution.Red and white Chinook salmon: genetic divergence and mate choice.Sexual selection and the evolutionary dynamics of the major histocompatibility complex.
P2860
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P2860
Ultra-deep Illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata).
description
2014 nî lūn-bûn
@nan
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
2014年论文
@zh
2014年论文
@zh-cn
name
Ultra-deep Illumina sequencing ...... e guppy (Poecilia reticulata).
@en
Ultra-deep Illumina sequencing ...... number variation in the guppy
@nl
type
label
Ultra-deep Illumina sequencing ...... e guppy (Poecilia reticulata).
@en
Ultra-deep Illumina sequencing ...... number variation in the guppy
@nl
prefLabel
Ultra-deep Illumina sequencing ...... e guppy (Poecilia reticulata).
@en
Ultra-deep Illumina sequencing ...... number variation in the guppy
@nl
P2093
P2860
P356
P1476
Ultra-deep Illumina sequencing ...... e guppy (Poecilia reticulata).
@en
P2093
Ian G Paterson
Jackie Lighten
Paul Bentzen
P2860
P304
P356
10.1111/1755-0998.12225
P577
2014-02-05T00:00:00Z