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A genetic variation map for chicken with 2.8 million single-nucleotide polymorphismsGENETICS and G3: community-driven science, community-driven journalsGENETICS and G3: community-driven science, community-driven journalsThe EADGENE Microarray Data Analysis Workshop (open access publication).Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication)Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)Analysis of a simulated microarray dataset: comparison of methods for data normalisation and detection of differential expression (open access publication).Combined analyses of data from quantitative trait loci mapping studies. Chromosome 4 effects on porcine growth and fatnessWhy breeding values estimated using familial data should not be used for genome-wide association studiesPredicting heterosis for egg production traits in crossbred offspring of individual White Leghorn sires using genome-wide SNP data.Genome-wide association studies of growth traits in three dairy cattle breeds using whole-genome sequence data.Developing microsatellite markers from cDNA: a tool for adding expressed sequence tags to the genetic linkage map of the chicken.Rapid and robust association mapping of expression quantitative trait loci.Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection.Comparison of analyses of the QTLMAS XII common dataset. II: genome-wide association and fine mappingA combined strategy for quantitative trait loci detection by genome-wide association.The EADGENE and SABRE post-analyses workshop.Extensive QTL and association analyses of the QTLMAS2009 Data.Identification of novel candidate genes for the inverted teat defect in sows using a genome-wide marker panel.Analysis of the genetics of boar taint reveals both single SNPs and regional effectsGenomic selection for QTL-MAS data using a trait-specific relationship matrixAssociation analyses of the MAS-QTL data set using grammar, principal components and Bayesian network methodologies.Best linear unbiased prediction of genomic breeding values using a trait-specific marker-derived relationship matrixHeritability of cortisol response to confinement stress in European sea bass dicentrarchus labrax.Detection of quantitative trait loci for backfat thickness and intramuscular fat content in pigs (Sus scrofa).Identification of quantitative trait loci for production traits in commercial pig populationsGenomic selection needs to be carefully assessed to meet specific requirements in livestock breeding programs.Genome-wide scan for body composition in pigs reveals important role of imprintingGenome Scan for Parent-of-Origin QTL Effects on Bovine Growth and Carcass Traits.Accuracy of Predicted Genomic Breeding Values in Purebred and Crossbred PigsGenomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association analysisThe genetic dissection of immune response using gene-expression studies and genome mapping.Genetical genomics in humans and model organisms.Predicted optimum ambient temperatures for broiler chickens to dissipate metabolic heat do not affect performance or improve breast muscle quality.A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle.Detecting parent of origin and dominant QTL in a two-generation commercial poultry pedigree using variance component methodology.Efficiency of genomic prediction for boar taint reduction in Danish Landrace pigs.The efficiency of mapping of quantitative trait loci using cofactor analysis in half-sib designA region on chicken chromosome 2 affects both egg white thinning and egg weightThird Report on Chicken Genes and Chromosomes 2015.
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Dirk Jan De Koning
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F-3399-2013
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