about
IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programmingAdaptive seeds tame genomic sequence comparisonRactIP: fast and accurate prediction of RNA-RNA interaction using integer programmingImproving the accuracy of predicting secondary structure for aligned RNA sequencesPredictions of RNA secondary structure by combining homologous sequence informationRtips: fast and accurate tools for RNA 2D structure prediction using integer programmingDirected acyclic graph kernels for structural RNA analysis.Robust and accurate prediction of noncoding RNAs from aligned sequencesPrediction of RNA secondary structure by maximizing pseudo-expected accuracy.Fast and accurate clustering of noncoding RNAs using ensembles of sequence alignments and secondary structures.DAFS: simultaneous aligning and folding of RNA sequences via dual decomposition.Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads.RNA secondary structural alignment with conditional random fields.Prediction of RNA secondary structure using generalized centroid estimators.CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score.CentroidHomfold-LAST: accurate prediction of RNA secondary structure using automatically collected homologous sequencesMetaVelvet-SL: an extension of the Velvet assembler to a de novo metagenomic assembler utilizing supervised learningWhole-Genome Sequencing and Comparative Genome Analysis of Bacillus subtilis Strains Isolated from Non-Salted Fermented Soybean FoodsSHARAKU: an algorithm for aligning and clustering read mapping profiles of deep sequencing in non-coding RNA processingResequencing of the common marmoset genome improves genome assemblies and gene-coding sequence analysis.Software.ncrna.org: web servers for analyses of RNA sequencesGenome-wide searching with base-pairing kernel functions for noncoding RNAs: computational and expression analysis of snoRNA families in Caenorhabditis elegans.CENTROIDFOLD: a web server for RNA secondary structure prediction.A Machine Learning Based Approach to de novo Sequencing of Glycans from Tandem Mass Spectrometry Spectrum.Improved measurements of RNA structure conservation with generalized centroid estimators.An extended genovo metagenomic assembler by incorporating paired-end information.Stem kernels for RNA sequence analyses.Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.COPICAT: a software system for predicting interactions between proteins and chemical compounds.Using binding profiles to predict binding sites of target RNAs.PSSMTS: position specific scoring matrices on tree structures.Prediction of Gene Structures from RNA-seq Data Using Dual DecompositionA NON-PARAMETRIC BAYESIAN APPROACH FOR PREDICTING RNA SECONDARY STRUCTURESImproved prediction of transcription binding sites from chromatin modification dataA Non-parametric Bayesian Approach for Predicting RNA Secondary Structures
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description
hulumtues
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հետազոտող
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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Kengo Sato
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P106
P108
P1153
36343914400
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P31
P496
0000-0001-6744-7390